| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_05800 |
|---|
| Symbol | |
|---|
| ID | 7759536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 558591 |
|---|
| End bp | 560012 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643803500 |
|---|
| Product | Drug resistance transporter EmrB/QacA subfamily |
|---|
| Protein accession | YP_002797808 |
|---|
| Protein GI | 226942735 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCG CCCTGCCGCT CTCCCCCCGC ACCGCCCGCC TGCTGCCCTG GATCATCGCC
ACCGCCCAAT TCATGCCGAT GCTCGACGGC ACCATCCTCA ACACCGCCCT GCCGACGATG
GCCAGGGATC TGGCCGAGGA CCCGCTGCGC ATGCAGTCGG TGGTGATCGC CTACATGCTC
AGCGTGGCGG TGCTGATGCC AGCCTCCGGA TGGATCTCCG ACCGCTTCGG CACCCACCGG
GTGTTCCTCG GCTCGATCCT GCTGTTCACC CTCGGCTCGC TGCTCTGCGC GCTCTCCGCT
TCGCTGCCGC AACTGGTCGC CGCGCGGGTG CTGCAGGGCT TCGGCGGCGC CCTGATGATG
CCGGTGGGAC GGCTGGTGGT GCTGCGCGCC TATCCGCGCA CGGAACTGGT GCGGGTGCTC
AGCTTCGTCA CCATGCCGGC GCTGCTCGGC CCGCTGCTCG GCCCGCCCCT CGGCGGCTGG
CTGGTGGAGT ACGCCAGTTG GCACTGGATC TTCCTGCTCA ACCTGCCGGT CGGCCTGTTC
GGCTGCCTGG TCGCCGCGCG CCTGATGCCC GATCTGCGCG GGCTGCAGCG GACGCGCTTC
GATACGCCGG GCTTCGCGCT GTTCGGCGCC GCCATGCTGC TGATCAGCAT CGCCCTGGAA
GGCCTCGGCG AATTGCATCT GCCGCACGCC CGGGTCGTGC TGCTGCTGCT CGCCGGCCTG
GCCTGCCTGG CCGCCTACTG GCTGCGCGCC GTCTTCGCCG AGGCGCCGCT GTTCTCGCCC
GGCCTGTTCC GCACCCACAG CTTCGCCATC GGCGTGCTCG GCAACCTGTT CACCCGCCTG
GGCAGCGGCG CCCTGCCCTT CCTCACGCCG CTGCTGCTGC AGCTCGGCCT GGGCTATTCG
CCGAGCCAGG CGGGCATGGC GATGATTCCC GTGGCCCTGA GTTCGATGGC CATGAAGCCG
CTGGCGCCCC GCCTGATCGA ACGTCTCGGT TACCGCCGGG TACTGGTCGG CAACACCCTG
CTGATCGGAG CCCTGCTGGC CAGCCTGGCG CTGGTCGACG GCGACACGCC CTATGCGCTC
CTGCTCCTGC ACCTGGGGCT GATCGGCGCG GTGAATTCCC TGCAGTTCTC GGCGATGAAC
ACCGTCGCCC TGATCGACCT GCCCACCCGC GACGCCAGCA GCGGCAACAG CCTGCTGTCG
GTGGTGGTTC AACTGTCCAT GAGCCTCGGC GTGGGCATCG GTGCCGCCCT GCTCAACGGT
TTCAGTGCCG ACGGCGCGGC CCAGGGCGAC TCGCTGCTCG CCGCCTTCCA GGGCACCTAT
GTCTGCGTCG GCCTGCTGGC GATGTTCGGC GCCACCCTGT TCTTCCAGTT GCGCCCCGAG
GATGGCCGCC CCGGCTGGCG GCACGACGAA TTGGCGGATT AG
|
|---|
| Protein sequence | MPTALPLSPR TARLLPWIIA TAQFMPMLDG TILNTALPTM ARDLAEDPLR MQSVVIAYML
SVAVLMPASG WISDRFGTHR VFLGSILLFT LGSLLCALSA SLPQLVAARV LQGFGGALMM
PVGRLVVLRA YPRTELVRVL SFVTMPALLG PLLGPPLGGW LVEYASWHWI FLLNLPVGLF
GCLVAARLMP DLRGLQRTRF DTPGFALFGA AMLLISIALE GLGELHLPHA RVVLLLLAGL
ACLAAYWLRA VFAEAPLFSP GLFRTHSFAI GVLGNLFTRL GSGALPFLTP LLLQLGLGYS
PSQAGMAMIP VALSSMAMKP LAPRLIERLG YRRVLVGNTL LIGALLASLA LVDGDTPYAL
LLLHLGLIGA VNSLQFSAMN TVALIDLPTR DASSGNSLLS VVVQLSMSLG VGIGAALLNG
FSADGAAQGD SLLAAFQGTY VCVGLLAMFG ATLFFQLRPE DGRPGWRHDE LAD
|
|---|
| |