Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_05490 |
Symbol | nudE |
ID | 7759505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 528948 |
End bp | 529514 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643803469 |
Product | ADP-ribose diphosphatase NudE |
Protein accession | YP_002797777 |
Protein GI | 226942704 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00271926 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAGA AACCCACCGT ACTCGCTCGA GCGATCGTCG CGACCAGCCG TCTGTTTCGC GTCGAGGAAT TGCAGTTGCG CTTCACCAAT GGCGTCGAGC GCACCTATGA GCGTCTGGTG GGTACCGGCA GCGGCTACGG CGCGGTGATG GTCGTCGCGC TGATCGACGA CCAGCACGCC CTGCTGGTGG AGGAGTACTG CGCCGGCACC GACGATTACC AGTTGTCCTT GCCCAAGGGA CTGATCGAGC CGGGCGAGGA CGTGCTGGTG GCGGCTAACC GCGAGCTGAA GGAGGAGGCC GGCTACGGCG CCCATCAACT GGAGTACCTC ACCGAGCTGT CCCTTTCGCC CGGCTACATG ACCCAGAAGA TCCAGGTGGT GCTGGCCCGC GACCTCTACC CCAAGCGCCT GCCGGGCGAC GAGCCGGAGC CGATGCGGGT CGAGCGGGTC AACCTGCGCG AGCTGTCCGG TCTGGTCCGG CATGCGCAGT TCAGCGAGGG ACGGGCCCTG GCCGCGCTCT ATCTGGCGCG CGATCTGCTG GTTCAGCGCG GAGCGCTGGT CCTGTGA
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Protein sequence | MRQKPTVLAR AIVATSRLFR VEELQLRFTN GVERTYERLV GTGSGYGAVM VVALIDDQHA LLVEEYCAGT DDYQLSLPKG LIEPGEDVLV AANRELKEEA GYGAHQLEYL TELSLSPGYM TQKIQVVLAR DLYPKRLPGD EPEPMRVERV NLRELSGLVR HAQFSEGRAL AALYLARDLL VQRGALVL
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