Gene Avin_04500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_04500 
SymbolcooF 
ID7759409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp427293 
End bp427850 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID643803371 
Productiron-sulfur cluster-binding protein CooF 
Protein accessionYP_002797681 
Protein GI226942608 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.489428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGA CCATCTTCAC CGTGGCCGAG AAGTGCGTCG CCTGCAAATC GTGCGAAATC 
GCCTGCGCGG TCGAACACTC CCGGTCGAAA ACCCTGGCCG GCGCCATCCT CGAGACGCCG 
CCGCCGCAGC GGCGGATCAA CGTGGAAGGC GTCGGCGCCT ACAGCTACCC GTCGCGCTGC 
CAGCATTGCA GCGATGCCGC CTGCGTCACC GCCTGCCCGA CCGGGGCGAT GCAGCGCGAC 
GGCTGTGACG CGGTGTTTTC CGATGCCGAC AAGTGCATCG GTTGCTGGAT GTGCGTGGTC 
GTCTGCCCCT TCGGCGGGGT GAGCGCCGAT CCGGTCGGCA AGAAGGCGCT GAAATGCGAC 
CGCTGCCCCG AGCGCACGGC CAAGGGCGAG GCGCCGGCCT GCGTGGCGGC CTGCCCGACC 
GGCACCCTCC TCTATCTCAC GCCGGAAGAA TTCGCCGCGG AACGCCGCCA GGCGACGGCC 
AGGGCGGCCA TCTGCGGCGG CCAGGCGGAC GAACCCAACG GCATGGATAT CCTGCGATCC 
CTGAAGAGAA CCCACTGA
 
Protein sequence
MSKTIFTVAE KCVACKSCEI ACAVEHSRSK TLAGAILETP PPQRRINVEG VGAYSYPSRC 
QHCSDAACVT ACPTGAMQRD GCDAVFSDAD KCIGCWMCVV VCPFGGVSAD PVGKKALKCD 
RCPERTAKGE APACVAACPT GTLLYLTPEE FAAERRQATA RAAICGGQAD EPNGMDILRS 
LKRTH