Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_04390 |
Symbol | hoxY |
ID | 7759398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 416490 |
End bp | 417260 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643803360 |
Product | soluble hydrogenase delta subunit, HoxY |
Protein accession | YP_002797670 |
Protein GI | 226942597 |
COG category | [C] Energy production and conversion |
COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCACCA AGCCACGCCT GGCGGTCTGG AAGTTCGCCT CCTGCGACGG CTGTCAACTG TCGTTGCTCG ACTGCGAGGA CGAGTTGCTG TCGCTCGCCG GGGCCGTGGA GATCGCCTAC TTCGCCGAGG CCTCCAGCGC CATGGAGGAC GGCCCCTACG ACCTCTCGCT GGTGGAGGGC TCGGTCACCA CGGCCCATGA CGCCGAGCGC ATCCGCGAGG TGCGCCGGCA ATCGAAGCTC CTCGTCACCA TCGGCGCCTG CGCCACCGCC GGAGGCATCC AGGCGCTGCG CAACTTCGCC GACGTGAACG ACTATCTCGC GGTCGTCTAC GCCTCGCCGC GCTACATCGA GACTCTGGCC ACCTCGACGC CGATCGCCGC CCACGTGCCG GTGGACTTCG AGTTGCGCGG CTGCCCGATC AACAAGGTGC AGCTCCTGGA GGTGATCGCG GCTTTCCTCG CCGGGCGCAA GCCGGCGATC CCCACCTACA GCGTGTGCAT CGAGTGCAAG CGGCGCGGCA ACCTCTGCGT GATGGTGCAG GGCACGCCCT GCCTGGGGCC GGTGACCCAG GCCGGCTGCG GCGCGCTCTG TCCGGGCTGC CGGCGCGGCT GCTACGGCTG CTACGGGCCG ATGGAAACCC CCGACACCGC CATGCTGGCG CGCCAGTGGA GCGCCATGGG CGTCGCGTCG CGCGACATCC GCCGCGCCTT CCACAGCTTC AATGCCTGGG CGCCGGCGTT CCGCGAGGAG GGCGAGGCCC ATGACGACTA A
|
Protein sequence | MRTKPRLAVW KFASCDGCQL SLLDCEDELL SLAGAVEIAY FAEASSAMED GPYDLSLVEG SVTTAHDAER IREVRRQSKL LVTIGACATA GGIQALRNFA DVNDYLAVVY ASPRYIETLA TSTPIAAHVP VDFELRGCPI NKVQLLEVIA AFLAGRKPAI PTYSVCIECK RRGNLCVMVQ GTPCLGPVTQ AGCGALCPGC RRGCYGCYGP METPDTAMLA RQWSAMGVAS RDIRRAFHSF NAWAPAFREE GEAHDD
|
| |