Gene Avin_04080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_04080 
Symbolmqo 
ID7759367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp388420 
End bp390039 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content65% 
IMG OID643803330 
Productmalate:quinone oxidoreductase 
Protein accessionYP_002797641 
Protein GI226942568 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00990069 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC TGTTACTGAC CTTCTTGTGC GCCAGCATCG TCGGCTGCGC CAAGCAGGAC 
GACGCGGAGA AGACCGTGGA CGTCCTGCTG ATCGGCGGCG GCATCATGAG CGCCAGCCTC
GGCACTTACC TCAAGGAGCT GGAGCCCGAC TGGACGATCG ACATCTACGA ACGCCTCGAC
CAGGTCGCCG AGGAAAGCTC CAATCCCTGG AACAACGCCG GCACCGGCCA CTCGGCGTTC
TGCGAACTGA ACTACACCTC CGAGAAACCC GACGGCCATG TCGACATCAG CAAGGCGCTG
GCGGTCACCG AATCCTTCGA GATCTCCCGG CAGTTCTGGG CCCACCAGAT CGATAAGGGC
GTGCTGAGCA ATCCGAAATC CTTCATCAAC GACGTGCCGC ACATCAGCTT CGTCTGGGGC
GACGAGAACG TCGCCTTCCT GAAGAAACGC CACGAGGCGA TGCAGCACAG CTCCCTGTAC
CGCGGCATGG AGTACACGGA AGACCACGCG ACCATCAACG AATGGGCGCC GCTGGTGATG
GAGGGCCGCA CGGCCGGCCA GAAGGTCGCC GCGACGCGCA TGCCGATCGG CACCGACGTC
AACTTCGGCG AAATCACCCG CCAATTGATG GGTGCGCTGA CCAGGCACGG CAACGTCACG
CTGAACCTCA AGCACGAGGT ACGCGACTTC GTACGCAACG ACGACGGCAC CTGGAACGTG
ACGGTCGCCG ACCTGGCCAA GGGCGGCGAG GAGAAGACCG TCAAGGCTAA GTTCGTGTTC
ATCGGCGCCG GCGGCGGCGC GCTGCCGCTG CTGCAGAAGA CCGGCATCCC CGAGGCCGAC
GGCTATGCCG GCTTCCCGGT GGGCGGCCAG TTCCTCTACA CCACCAACCC CGAGGTCGTC
GAACGCCACC TGGCCAAGGT CTACGGCAAG GCCTCCGTCG GCGCCCCGCC GATGTCCGTG
CCGCATCTGG ACACCCGCGT GATCGACGGC AAGCGGGCGA TCCTGTTCGG ACCCTTCGCC
ACCTTCTCCA CCAAGTTCCT GAAGAAGGGC TCGCTGCTGG ATATGCCGCG CTCGCTGAGC
ACGGACAACT TCATGCCGAT CATGCACGCC GGCCTCGACA ACCTGCCGCT CAGCACCTAC
CTGATCGGCC AGTTGATGCT CAGCCAGGAA GAACGCATCG AGGAACTGCG CGAGTATTTC
CCGCAGGCCA AGGCCGAGGA CTGGAAACTG CTGACCGCCG GCCAGCGCGT CCAGGTCATC
AAGAAGGACC CGGAGAAAGG CGGCGTCCTG CAGTTCGGCA CCGAAGTCGT GGCCGCCGCG
GACGGCAGCA TCGCCGCGCT GCTGGGCGCC TCGCCGGGCG CCTCCACCGC CGCGCCGATC
ATGCTCACCG TGCTGGAAAA GACCTTCAAG GACAGGATCG GGACTCCCGA GTGGCAGGCC
AAGCTGAAGG AAATCGTTCC CTCCTACGGC CAGAAGCTCA ACAACAACAT CGAGCTGACC
AATAACATCC GCGCCATGAC CAGCGAGCGC CTGCAACTGC GCTTCATGCC GGTCGAGCCG
GAAGCCGCCG AGGCCCAGGC CGAGGCCACT GCTCCCCAAC CCGCCCAGGC GGCCCTGTAA
 
Protein sequence
MKKLLLTFLC ASIVGCAKQD DAEKTVDVLL IGGGIMSASL GTYLKELEPD WTIDIYERLD 
QVAEESSNPW NNAGTGHSAF CELNYTSEKP DGHVDISKAL AVTESFEISR QFWAHQIDKG
VLSNPKSFIN DVPHISFVWG DENVAFLKKR HEAMQHSSLY RGMEYTEDHA TINEWAPLVM
EGRTAGQKVA ATRMPIGTDV NFGEITRQLM GALTRHGNVT LNLKHEVRDF VRNDDGTWNV
TVADLAKGGE EKTVKAKFVF IGAGGGALPL LQKTGIPEAD GYAGFPVGGQ FLYTTNPEVV
ERHLAKVYGK ASVGAPPMSV PHLDTRVIDG KRAILFGPFA TFSTKFLKKG SLLDMPRSLS
TDNFMPIMHA GLDNLPLSTY LIGQLMLSQE ERIEELREYF PQAKAEDWKL LTAGQRVQVI
KKDPEKGGVL QFGTEVVAAA DGSIAALLGA SPGASTAAPI MLTVLEKTFK DRIGTPEWQA
KLKEIVPSYG QKLNNNIELT NNIRAMTSER LQLRFMPVEP EAAEAQAEAT APQPAQAAL