Gene Avin_03310 details

Gene Information

• Locus tag: Avin_03310
• Symbol: ilvD
• ID: 7759291
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 308264
• End bp: 310102
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643803255
• Product: Dihydroxy-acid dehydratase
• Protein accession: YP_002797566
• Protein GI: 226942493
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGACT ACCGCTCGAA AACCTCCACC TTCGGCCGCA ACATGGCCGG CGCCCGTGCG 
CTGTGGCGCG CCACCGGGAT GAAGGACGAG GACTTCAAGA AGCCGATCAT CGCCGTCGCC 
AACTCCTTCA CCCAGTTCGT GCCCGGCCAT GTGCACCTGA AGGACCTGGG CCAACTGGTC 
GCCCGCGAGA TCGAGAAGGC CGGCGGCGTG GCCAAGGAAT TCGACACCAT CGCCGTGGAC 
GACGGCATCG CCATGGGCCA CGACGGCATG CTCTATTCGC TGCCGTCGCG CGAGATCATC 
GCCGACTCGG TGGAATACAT GGTCAACGCC CATTGCGCCG ACGCCCTGGT GTGCATCTCC 
AACTGCGACA AGATCACCCC CGGCATGCTG ATGGCCTCGC TGCGCCTGAA CATCCCGGTG 
GTGTTCGTCT CCGGCGGGCC GATGGAGGCC GGCAAGACCA AGCTGTCCCA GCACGGCCTG 
GATCTGGTGG ATGCGATGGT CATCGCCGCC GACAGCAGCG CCTCCGACGA AAAGGTCGAG 
GCATACGAAC GCAGCGCCTG TCCCACCTGC GGCTCCTGTT CCGGCATGTT CACCGCCAAC 
TCGATGAACT GCCTGACCGA AGCCCTGGGC CTGTCGCTGC CGGGTAACGG CACCATCGTC 
GCCACCCATG CCGACCGCCG GGAACTCTTC CTGCAAGCCG GGCGCACCAT CGTCGACCTG 
TGCCGCCGCT ACTACCAGGA AGGCGACGAA TCCGTACTGC CGCGCGCCAT CGCCAGCCGC 
GCGGCCTTCG AGAACGCCAT GACCCTGGAC ATCGCCATGG GCGGCTCGAC CAACACCATC 
CTGCACCTGT TGGCGGCGGC CCAGGAAGCC GAAGTGGACT TCGATCTGCA CGCCATCGAC 
GCCCTGTCGC GCCAGGTGCC GCAACTCTGC AAAGTGGCGC CGAACACGCC CAAGTACCAC 
ATCGAGGATG TGCATCGCGC CGGCGGCATC GTCGCCATTC TCGGCGAACT GGCCCGTGCC 
GGCCTGCTGA ACACCGAAGT CGCCACCGTT CACAGCAAGA CCCTGGGCGA AGCCATCGAA 
AAATGGGATG TGCGGGTCAA CCGGGATCAA GCCGTGCATA CCTTTTTCAA GGCCGGCCCG 
GCCGGCATTC CTTCCCAGGA AGCCTTCAGC CAGAGCGAAC GCTGGGACAG CCTGGACCTG 
GACCGCGCCG AAGGCTGCAT CCGCGACCTG GAACACGCTT TCTCCACGGA AGGCGGCCTG 
GCCGTGCTGT ACGGCAACAT CGCCCTGGAC GGCTGCGTGG TGAAGACCGC CGGCGTGGAT 
GAATCCATCC TGGTGTTCGA GGGCACCGCG AAGATCTTCG AAAGCCAGGA CGCCGCGGTG 
AAGGGCATCC TCGGCGACGA GGTCAAACCC GGAGACGTGG TGGTGATCCG CTACGAGGGT 
CCGAAAGGCG GCCCCGGCAT GCAGGAAATG CTCTACCCGA CCTCGTATCT GAAGTCCAAG 
GGACTCGGCA AGCAGTGCGC CCTGCTCACC GACGGCCGCT TCTCCGGAGG CACCTCGGGC 
CTGTCGATCG GCCACGCCTC GCCGGAAGCG GCCGCGGGCG GCGCCATCGG CCTGGTGGAA 
GACGGCGACA AGATCCTCAT CGACATCCCC AACCGCAGCA TCAACCTGCT GGTGTCCGAC 
GAGGAACTGA AGGCCCGCCG CCTGCACCAG GACCACAAGG GCTGGAAGCC GGCCGCACCG 
CGCGCGCGCA AGGTCAGCAC CGCGCTCAAG GCCTACGCCC TGCTCGCCAC CAGCGCCGAC 
AAGGGCGCGG TGCGCAACAA GGCGCTGCTG GATGAGTGA 

 

Protein sequence

MPDYRSKTST FGRNMAGARA LWRATGMKDE DFKKPIIAVA NSFTQFVPGH VHLKDLGQLV 
AREIEKAGGV AKEFDTIAVD DGIAMGHDGM LYSLPSREII ADSVEYMVNA HCADALVCIS 
NCDKITPGML MASLRLNIPV VFVSGGPMEA GKTKLSQHGL DLVDAMVIAA DSSASDEKVE 
AYERSACPTC GSCSGMFTAN SMNCLTEALG LSLPGNGTIV ATHADRRELF LQAGRTIVDL 
CRRYYQEGDE SVLPRAIASR AAFENAMTLD IAMGGSTNTI LHLLAAAQEA EVDFDLHAID 
ALSRQVPQLC KVAPNTPKYH IEDVHRAGGI VAILGELARA GLLNTEVATV HSKTLGEAIE 
KWDVRVNRDQ AVHTFFKAGP AGIPSQEAFS QSERWDSLDL DRAEGCIRDL EHAFSTEGGL 
AVLYGNIALD GCVVKTAGVD ESILVFEGTA KIFESQDAAV KGILGDEVKP GDVVVIRYEG 
PKGGPGMQEM LYPTSYLKSK GLGKQCALLT DGRFSGGTSG LSIGHASPEA AAGGAIGLVE 
DGDKILIDIP NRSINLLVSD EELKARRLHQ DHKGWKPAAP RARKVSTALK AYALLATSAD 
KGAVRNKALL DE