| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_02780 |
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| Symbol | vnfA |
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| ID | 7759238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 262210 |
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| End bp | 263778 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643803202 |
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| Product | vanadium nitrogenase sigma54-dependent transcriptional activator, VnfA |
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| Protein accession | YP_002797513 |
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| Protein GI | 226942440 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.274487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCC TCCCCCAATA CTGCGAATGC GGCCTCGGCG AGTGCCGTAC GGACGTGTTG
CCGCTGCTCT ACGAAATGAG CCAGATCGCC ACGGAAAGCG GCGATCTGTC GAGCATCATC
AGCATCCTGC TGCGCCTGAT GAAGCGCCAC ATGAAAGTGG TGCGCGGCAT GGTCACCCTC
TACGACCGGG ACTCCGGCAG CATCGTCCTG CACGAGAGCT TCGGCCTCAG CCCCGAAGAG
GCCGGCAAGG GCGTCTATCT GCTCGGCGAA GGCATCATCG GGCGGGTGGT GGAAACCGGC
CAGAGCATCG TGGTGCCCTG CATCCGCGAC GAGCCGGCGT TCCTCAACCG CACCGGCAGC
CGCGACTGCG ACAGCGACGA CGCCAACCTG TCGTTCATCT GCGTGCCGAT CCTGCGCGGT
CGCCAGGTGA TGGGCACGAT CAGCGCCGAG CGTCTCTACG ACAACGCCGA ACTGCTCAAG
CTGGACGTCG AGGTGCTGTC GATCCTGGCC ACCACCACCG CCCAGGCGGT CGAACTGTAC
TTGGTGGAGA ACGTCGAGAA CGTCGCCCTG GAGGCGGAGA ACCGTCGCCT GCGCAGCGCC
CTGGGGGAGC GCTTCAAGCC CGCCAACATC ATCGGCAATT CCAAGCCGAT GCTCGAGGTC
TATCAACTGA TCGAGCGCGT GGTGCGTACC AGGACCACGG TGCTGATCCT CGGCGAGAGC
GGCGTCGGCA AGGAGCTGGT GGCCGGCGCC ATCCACTACA ACAGCCCGGC GGCCAAGGGG
CCGTTCGTCA AGTTCAACTG CGCCTCGCTG CCCGAATCGG TCATCGAGAG CGAGCTGTTC
GGCCACGAGA AGGGCTCCTT CACCGGCGCC ATCGGGCTGC GCAAGGGTCG CTTCGAGGAA
GCCGCCGGCG GCACCATCTT CCTCGACGAG GTCGGCGAGA TGTCGCTGAC CACCCAGGCC
AAGCTGCTGC GCGTGCTGCA GGAGCGCAGC TTCGAGCGGG TCGGCGGCAA CACCACCATC
CACGTCGACC TGCGGGTGAT CGCCGCGACC AACCGCAACC TCGCCGAGAT GGTCGCCGAC
GGCACCTTCC GCGAGGACCT CTACTACCGC CTCAACGTCT TCCCCATCAC CATCCCGCCA
CTGCGCGAGC GCGGCAGCGA CATCATCACC CTGGCCGACC ACTTCGTCTC GCGCTTCTCC
AGGGAAATGG GCATCGAGGT CAAGCGCATC TCCACCCCGG CGCTGAACAT GCTGCAGAGC
TACCAGTGGC CGGGCAACGT GCGCGAACTG GAGAACGTCA TCGAACGCGC CATGCTGCTC
AGCGAGGACG GGGTGATCCA CGGCTACCAT CTGCCGCCGT CGCTGCAGGC GCCGGTGGTC
GGCGACAGCG AAGCGCCGCC GGACGGCCTA GAGGCGCGCC TCGGCGCCAT CGAGTACGAA
CTCATCGTCG AAGCCCTCAA GCTGCACCAC GGCAACATGA CCGAGGCGGC CACCCACCTC
GGCCTGACCC GCCGCGTGCT CGGCCTGCGC ATGGGCAAGT ACAACCTCAA CTACAAGGAC
TACCGCTGA
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| Protein sequence | MSSLPQYCEC GLGECRTDVL PLLYEMSQIA TESGDLSSII SILLRLMKRH MKVVRGMVTL
YDRDSGSIVL HESFGLSPEE AGKGVYLLGE GIIGRVVETG QSIVVPCIRD EPAFLNRTGS
RDCDSDDANL SFICVPILRG RQVMGTISAE RLYDNAELLK LDVEVLSILA TTTAQAVELY
LVENVENVAL EAENRRLRSA LGERFKPANI IGNSKPMLEV YQLIERVVRT RTTVLILGES
GVGKELVAGA IHYNSPAAKG PFVKFNCASL PESVIESELF GHEKGSFTGA IGLRKGRFEE
AAGGTIFLDE VGEMSLTTQA KLLRVLQERS FERVGGNTTI HVDLRVIAAT NRNLAEMVAD
GTFREDLYYR LNVFPITIPP LRERGSDIIT LADHFVSRFS REMGIEVKRI STPALNMLQS
YQWPGNVREL ENVIERAMLL SEDGVIHGYH LPPSLQAPVV GDSEAPPDGL EARLGAIEYE
LIVEALKLHH GNMTEAATHL GLTRRVLGLR MGKYNLNYKD YR
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