| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_02130 |
|---|
| Symbol | trpA |
|---|
| ID | 7759174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 207198 |
|---|
| End bp | 208007 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643803138 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_002797449 |
|---|
| Protein GI | 226942376 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC TGCAGACCCG CTTCGCCGAA CTGAAGCAAG CCGACCGCGC CGCCCTGGTC
ACCTTCGTCA CCGCCGGCGA CCCGGACTAC GAAACCTCTC TCGCCATCCT CAAGGGCCTG
CCGGAAGCCG GCGCCGACGT GATCGAGCTG GGCATGCCCT TCACCGACCC GATGGCCGAC
GGCCCGGCGA TCCAACTGGC CAACATCCGC GCCCTCGGCG CCGGCCAGAA CCTGGTCAAG
ACCCTGCGTA TGGTTCGCGC CTTCCGCGAA GGCGATCGGA CCACCCCGCT GGTGCTGATG
GGCTACTTCA ACCCCATTCA CTACTATGGT GTCGAACGCT TCATCGCCGA GGCCAGGGAG
GCCGGCGTCG ATGGTCTGAT CGTCGTCGAC CTGCCGCCGG AGCATAACGA GGACCTCTGC
GATCCGGCAC AGGCGGCGGG CCTGGACTTC ATCCGCCTGA CCACCCCGAC CACCGACGAC
AAGCGCCTGC CCAGGGTGCT CGCCGGCAGC TCCGGCTTCG TCTACTACGT CTCGGTGGCC
GGCGTCACCG GCGCCCACGC CGCATCCCTG GAGCACGTCG AACAGGCTGT CGCCCGCCTG
CGCCGTCACA CCGACCTGCC GCTGTGCATC GGCTTCGGCA TCCGCAGCCC GGAACACGCC
GGCAGCGTCG CCCGCCTGGC CGAGGGCGTG GTGGTGGGCT CGGCATTGGT CGACCGCATT
GCCAAGGCCG GCTCGAAGGA GCAGGCGGTG GGGGATGTGT TGGGCTTGTG TCGGGAGTTG
GCTGAGGGAG TTCGGAGGGC GAGGAGGTAA
|
|---|
| Protein sequence | MSRLQTRFAE LKQADRAALV TFVTAGDPDY ETSLAILKGL PEAGADVIEL GMPFTDPMAD
GPAIQLANIR ALGAGQNLVK TLRMVRAFRE GDRTTPLVLM GYFNPIHYYG VERFIAEARE
AGVDGLIVVD LPPEHNEDLC DPAQAAGLDF IRLTTPTTDD KRLPRVLAGS SGFVYYVSVA
GVTGAHAASL EHVEQAVARL RRHTDLPLCI GFGIRSPEHA GSVARLAEGV VVGSALVDRI
AKAGSKEQAV GDVLGLCREL AEGVRRARR
|
|---|
| |