Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_02010 |
Symbol | engB |
ID | 7759162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 195253 |
End bp | 195903 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643803126 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_002797437 |
Protein GI | 226942364 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.646558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTCA AGAATCCCGT TCTCGGCCTG TGCCAGCAGG CCGCCTTCAT GCTCAGCGCC GCCCGGGTCG ACCAGTGCCC TGCCGACGAC GGCCTAGAGG TCGCCTTCGC CGGGCGCTCC AATGCCGGCA AGTCCAGTGC GCTGAACACC CTGACCCACG CCAACCTCGC GCGCACCTCG AAGACTCCGG GTCGCACCCA GTTGCTGAAT TTCTTCCGTC TCGACGACCG GCGTCGCCTG GTCGACCTGC CCGGCTACGG CTATGCCAAG GTGCCGATCC CCCTCAAGCA GCACTGGCAG CACCATCTGG AGGCCTATCT GGGCAGCCGT CGCAGCCTGG CCGGCGTGGT GCTGTTGATG GACATCCGCC ACCCGCTGAC CGACTTCGAC CGGATGATGC TCGACTGGGC CGGCGCCAGT GGCATGCCCA TGCACATCCT GCTGACCAAG GCCGACAAGC TGGCCTTCGG CGCGGCGAAG AACGCCCTGC TCAAGGTCCG GCGGGAAATC CACAAGGGCT GGGGCGAGGG CATGAGCGTC CAACTGTTCT CGGCGCCCAA GCGTCAGGGG GTCGAGGAGG CCCACGACGT GCTGGCGCGC TGGCTGGGAC TGGCCGGGGA CGACGGGGGC GAGGCGGATG CCGGGGCCTG A
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Protein sequence | MSFKNPVLGL CQQAAFMLSA ARVDQCPADD GLEVAFAGRS NAGKSSALNT LTHANLARTS KTPGRTQLLN FFRLDDRRRL VDLPGYGYAK VPIPLKQHWQ HHLEAYLGSR RSLAGVVLLM DIRHPLTDFD RMMLDWAGAS GMPMHILLTK ADKLAFGAAK NALLKVRREI HKGWGEGMSV QLFSAPKRQG VEEAHDVLAR WLGLAGDDGG EADAGA
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