Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_01890 |
Symbol | |
ID | 7759150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 184046 |
End bp | 187186 |
Gene Length | 3141 bp |
Protein Length | 1046 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643803114 |
Product | Hydrophobe/amphiphile efflux-1 HAE1 |
Protein accession | YP_002797425 |
Protein GI | 226942352 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGAT TTTTTATCGA TCGCCCTATC TTTGCCTGGG TGATTGCCTT GGTGATCATG TTGGCTGGTG GGCTATCCAT TCTTGGGTTG CCAATCAATC AATATCCAAG TATCGCTCCG CCGGCGGTGA GCATTTCCGT GACCTATCCG GGCGCTTCGG CACAGACCGT TCAGGATACG GTAGTGCAAG TGATCGAGCA GCAGCTCAAC GGTATCGACA ACCTGCGCTA CATCACTTCG GACAGCAATT CGGATGGCAA CATGACCATC ACTGCCACCT TCGAACCCGG TACCGATGCG GACATTGCCC AGGTTCAGGT TCAGAACAAA CTGCAACTGG CCACCCCGCT GTTGCCACAG GAGGTTCAGC AGCAGGGCAT CCGAGTGACC AAGTCGGTGC GAAACTTTCT CTTGATCGTT GGCTTCGTTT CCGAAGATGG CAGTATGGAC CGCAACGATC TGGCCAACTA TATCGTTTCC AATATTCAGG ATCCCCTTTC CCGGGCCAAG GGCGTGGGTG ATTTCCAGGT CTTCGGCTCG CAATATGCCA TGCGCATCTG GCTGGACCCG GCCCGCCTGA ACAACTTCCA GTTGACTCCG GTGGATGTGC GCAACGCGGT CGAGAGCCAG AATGTCCAGG TTTCCTCCGG CCAGTTCGGC GGTCTTCCGG CCGTACCCGA CCAGCAACTC AGTGCCACGA TCATCGGCAA GACCCGTCTG CAGACAGCCG AGCAGTTTCG CGACATCCTG CTTAAAGTCA ATGGCGACGG CTCGCAGGTG CGCCTGGACG ATGTCGCCGA GGTGGGACTG GGTGGTGAGA ATTACAGCAT CACTTCGACC TACAACGGGC GGCCCGCCGC GGGAATGGCG ATCAGGCTCG CGACCGATGC CAACGCACTG GAAACGGCCC AGGCGGTGCG GGATACCCTC GCCGAACTGG AGCCTTTTTT CCCGCCGGGG GTGAAAGTCG TCTACCCCTA TGACACTACG CCGGTGATCT CGGCCTCCAT CGAGGAGGTG GTGAAAACCC TCGGCGAGGC GATCGTCCTG GTCTTTCTGG TGATGTACCT GTTTCTGCAG AACGTCCGGG CCACGCTGAT TCCGACCCTG GCGGTCCCGG TGGTGCTGCT CGGCACCTTT GGTGTGCTCG CCGCATTCGG TTTCACCATC AATACCCTGA CCATGTTCGC CATGGTGCTG GCCATCGGTC TGCTGGTCGA TGACGCCATC GTGGTAGTCG AGAACGTCGA GCGGGTCATG GTCGAGGATG GCTTGCCACC GCGGGAGGCC ACACGCAAGT CGATGGGACA GATCCAGGGT GCTTTGGTCG GCATTGCCTT GGTGCTGTCC GCAGTGTTCG TACCCATGGC CTTTTTCGGT GGCTCGACCG GGGTAATCTA TCGACAGTTC TCCATCACCA TCGTCGCTGC CATGGCGCTA TCGGTACTGG TCGCGCTGAT CTTCACCCCG GCGCTCTGTG CGACTCTGCT CAAGCCCGTG AGCAGAGGCG AGCATCACCG GAAGCGTGGT TTCTTCGGCT GGTTCAACCG CAGCTTCGAG CGCAGTGTCC GAGGTTACGA GCGTGGCGTC AGGCAGGTGC TCGGCCGCAA GCTACCTTAT CTGTTGCTCT ACTTGGCAAT AGTCGCGCTC ATGGTTTGGT TGTTCAGCCG TATACCGACC GCTTTCCTGC CCGACGAGGA TCAAGGCGTG CTCTACGCGC AAGTGCAGAC CCCCTCGGGG TCCAGCGCTG AGCGAACCCA ACTGGTGGTG GACGAAATGC GCAATTACCT GCTGACGGAG GAGGGTCATC TGGTCAACTC GGTTTTCACC GTCACCGGCT TCAATTTCGC AGGCCGGGGG CAGAGTTCCG GCTTGGCATT CATCTCATTG AAGCCTTGGG CCGAGCGGAC CGGTGAAGAA GATGATGTGT TTGCCCTCGC CCAGCGTGCC CAGCAGCGCT TTGCCGGGTT TCGCGACGCC CTGGCCTTCG CTTATGCTCC ACCGGCGGTG ATGGAGTTGG GCAATGCCAG TGGCTTCGAT GTCTTTTTGC AGGACCGCGC CGGCGTCGGC CACGAAGCGT TGAGCGCAGC CCGCGACCAG TTTCTCGCCC GCGCTGCGAA GAATCCCGTG CTCAGCCGGG TACGTGCCAA TGGTCTGCGC GACGAGCCGC AGTATCGCCT GTTGATCGAT GACGAACTGG CCCGTGCCTA TGGTGTCCCC CTGGCGGACA TCAACAGCAG CATCTCCATC GCCTGGGGTG CCAGCTACGT CAACGATTTC ATCGATCGGG GACGGGTGAA GAAGGTCTAT CTGCAGGGCG AGCCGAAGGC ACGCATGACT CCCGAAGACC TCGGCAAGTG GTTCGTGCGC AATGCGGCCG GCACCATGGT GCCCTTCAGT GCTTTCGCCA ACGGCGAGTG GACCTACGGT CCGCCGAAAC TGGCCCGTTA CAATGGCGTC TCGGCGATGG AGATTCTCGG CGAGCCGGCA CCCGGTTACA GCTCCGGGGA GGCCATGGCC GAGGTGGAAC GGATCGCCGA GGAATTGCCG CCGGGTATCG GTTACGCCTG GACCGGCCTG TCCTACGAAG AGCGTCTTTC CGGATCCCAG GCGCCAGCGC TCTACGCACT CTCGCTGCTG GTGGTGTTCC TTTGCCTGGC GGCCCTCTAC GAAAGCTGGT CGATTCCTTT CTCGGTGATG CTGGTCGTGC CGCTGGGAGT CATAGGCGCG CTCTGCTTCA CCAGCCTGCG CGGACTCTCC AATGATGTTT ACTTCCAGGT GGGCCTGCTC ACCACCGTCG GCTTGTCGGC GAAGAATGCG ATCCTCATCG TCGAGTTTGC CAAGGACCTG CACGAGCAGG GTATGGCGCT CCCGGAGGCA GCAGTGGAGG CCTGCCGCAT GCGCCTGCGG CCGATCATCA TGACTTCTCT GGCATTCATC CTCGGTGTCG TGCCGCTGGC CGTCTCCAGC GGTGCCGGTG CCGGTGCCGG CAGCCAGCAT GCCATCGGTA CGGGAGTGAT CGGCGGCATG CTCACCGCCA CGGTGCTGGC GATCTTCTGG GTGCCGCTAT TCTACGTATT GGTGTCATCC CTGTTCGGGG ATCGTCGCCC CGAGGCTGCC GACCGCGGTG AGGTGCCATG A
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Protein sequence | MSGFFIDRPI FAWVIALVIM LAGGLSILGL PINQYPSIAP PAVSISVTYP GASAQTVQDT VVQVIEQQLN GIDNLRYITS DSNSDGNMTI TATFEPGTDA DIAQVQVQNK LQLATPLLPQ EVQQQGIRVT KSVRNFLLIV GFVSEDGSMD RNDLANYIVS NIQDPLSRAK GVGDFQVFGS QYAMRIWLDP ARLNNFQLTP VDVRNAVESQ NVQVSSGQFG GLPAVPDQQL SATIIGKTRL QTAEQFRDIL LKVNGDGSQV RLDDVAEVGL GGENYSITST YNGRPAAGMA IRLATDANAL ETAQAVRDTL AELEPFFPPG VKVVYPYDTT PVISASIEEV VKTLGEAIVL VFLVMYLFLQ NVRATLIPTL AVPVVLLGTF GVLAAFGFTI NTLTMFAMVL AIGLLVDDAI VVVENVERVM VEDGLPPREA TRKSMGQIQG ALVGIALVLS AVFVPMAFFG GSTGVIYRQF SITIVAAMAL SVLVALIFTP ALCATLLKPV SRGEHHRKRG FFGWFNRSFE RSVRGYERGV RQVLGRKLPY LLLYLAIVAL MVWLFSRIPT AFLPDEDQGV LYAQVQTPSG SSAERTQLVV DEMRNYLLTE EGHLVNSVFT VTGFNFAGRG QSSGLAFISL KPWAERTGEE DDVFALAQRA QQRFAGFRDA LAFAYAPPAV MELGNASGFD VFLQDRAGVG HEALSAARDQ FLARAAKNPV LSRVRANGLR DEPQYRLLID DELARAYGVP LADINSSISI AWGASYVNDF IDRGRVKKVY LQGEPKARMT PEDLGKWFVR NAAGTMVPFS AFANGEWTYG PPKLARYNGV SAMEILGEPA PGYSSGEAMA EVERIAEELP PGIGYAWTGL SYEERLSGSQ APALYALSLL VVFLCLAALY ESWSIPFSVM LVVPLGVIGA LCFTSLRGLS NDVYFQVGLL TTVGLSAKNA ILIVEFAKDL HEQGMALPEA AVEACRMRLR PIIMTSLAFI LGVVPLAVSS GAGAGAGSQH AIGTGVIGGM LTATVLAIFW VPLFYVLVSS LFGDRRPEAA DRGEVP
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