| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_01130 |
|---|
| Symbol | |
|---|
| ID | 7759080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 116189 |
|---|
| End bp | 116767 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643803039 |
|---|
| Product | Trimeric LpxA-like superfamily protein |
|---|
| Protein accession | YP_002797355 |
|---|
| Protein GI | 226942282 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.339277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA GAACCTTCCA GGGCATCACC CCGATACTGG GCGAGCGGGT CTTCGTCGAC
CCCGCTTCCG TGGTCCTCGG TAACGTGGCG ATCGGCGACG ACAGCTCGAT CTGGCCGCAG
GTGGCGATCC GCGGCGACGT GCACCGCATC CGCATCGGCG CGCGCACCAG CATCCAGGAC
GGCAGCGTGC TGCACGTCAC CCATGCCGGG CCGTTCAACG CGGAAGGCCA CCCGCTGGAG
ATCGGCGACG AGGTCACCGT CGGCCACAAG GTGACCCTGC ACGGCTGCCG CATCGGCAAC
CGTGTGCTGG TCGGCATGGG CGCCATCGTG TTGGACGGCG CGGTGGTCGA GGACGAGGTG
ATCGTCGGCG CCGGCAGCCT GGTGCCGCCG GGCAAGACGC TGGAAAGCGG CTTCCTGTAC
GTCGGCAGCC CGGTGAAGCA GGTGCGCCCG CTGAACGACA AGGAGCGCGG CTTCTTCCGC
TACAGCGCCG ACAACTACGT GCGCCTGAAG GACCAGCACC TGGCCGAGCA CTACCTGCCG
CTGAAGGAGC CGCACCTGCT GGCCGATCAC GAAGACTGA
|
|---|
| Protein sequence | MTIRTFQGIT PILGERVFVD PASVVLGNVA IGDDSSIWPQ VAIRGDVHRI RIGARTSIQD
GSVLHVTHAG PFNAEGHPLE IGDEVTVGHK VTLHGCRIGN RVLVGMGAIV LDGAVVEDEV
IVGAGSLVPP GKTLESGFLY VGSPVKQVRP LNDKERGFFR YSADNYVRLK DQHLAEHYLP
LKEPHLLADH ED
|
|---|
| |