| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_01010 |
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| Symbol | ctaD |
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| ID | 7759068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 101490 |
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| End bp | 103082 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643803027 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_002797343 |
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| Protein GI | 226942270 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.113343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAG TGATCGAGCC GGGCCACACC GCCCATGACG AACACCCTCA CGGCCCGGCC
AGGGGCCCGA TGCGCTGGGT GCTGACCACC AACCACAAGG ACATCGGCAC GATGTACCTG
TGGTTCAGCT TCACCGCCTT CCTGCTCGGC GGCAGCATGG CCATGATCAT CCGCACCGAG
CTGTTCCAGC CGGGGCTGCA GATCGTCCAG CCGGAATTCT TCAACCAGAT GACCACCATG
CACGGCCTGA TCATGGTCTT CGGCGCGGTG ATGCCGGCCT TCGTCGGCCT GGCCAACTGG
ATGATCCCGC TGATGATCGG CGCGCCGGAC ATGGCCCTGC CGAGGATGAA CAACTTCAGC
TTCTGGCTGC TGCCGGCGGC CTTCGGCCTG TTGGTCAGCA CTCTGTTCAT GGAGGGCGGC
GGGCCGAACT TCGGCTGGAC CTTCTACGCG CCGCTGTCCA CCACCTTCGC GCCGGAGAGC
GTGACCTTCT TCATCTTCGC CATCCACCTG ATGGGCATCA GCTCGATCAT GGGCGCGATC
AACGTGATCG CCACCGTGCT CAACCTGCGC GCGCCGGGCA TGACCCTGAT GAAGATGCCG
CTGTTCTGCT GGACCTGGCT GATCACCGCC TTCCTGTTGA TCGCGGTGAT GCCGGTGCTG
GCCGGGGTGG TGACCATGAT GCTGATGGAC ATCCACTTCG GCACCAGCTT CTTCAATGCC
GCCGGCGGCG GCGACCCGGT GCTGTTCCAG CACGTGTTCT GGTTCTTCGG TCACCCCGAG
GTGTACATCA TGATCCTGCC GGCCTTCGGC GCGGTCAGCT CGATCATCCC GACCTTCGCC
CGCAAGCCGC TGTTCGGCTA CACCTCGATG GTCTACGCCA CCGGCGCCAT CGCCTTCCTG
TCCTTCATCG TCTGGGCCCA CCACATGTTC ACCGTGGGCA TACCGGTGAC CGGCGAGCTG
TTCTTCATGT ACGCCACCAT GCTGATCGCC GTGCCCACCG GGGTGAAGGT GTTCAACTGG
GTGTCGACCA TGTGGCGCGG CTCGCTGACC TTCGAGGCGC CGATGCTGTT CGCCGTGGCC
TTCGTCATCC TCTTCACCAT CGGCGGCTTC TCCGGGCTGA TGCTGTCCAT CGCGCCGGCC
GACTTCCAGT ACCACGACAC CTACTTCGTG GTCGCGCACT TCCACTACGT GCTGGTGCCC
GGAGCGATCT TCGGCATCTT CGCCTCGACC TACTACTGGC TGCCCAAGTG GACCGGACAC
ATGTACGACG AGCGCCTGGC CAGATGGCAT TTCTGGCTGT CCTTCGTCGG CATGAACCTG
GCCTTCTTCC CCATGCACTT CGTCGGCCTG GCCGGCATGC CACGGCGCAT TCCCGACTAC
AACCTGCAGT TCGCCGACTT CAACATGGTG TCCAGCCTCG GCGCCTTCCT GTTCGGCGCC
ACCCAGTTGC TGTTCCTGTA CATCGTCATC AAGTGCATCC GCGGCGGCGA GCCGGCCCCG
GCCAAGCCTT GGGACGGCGC CCACGGCCTG GAGTGGTCGG TGCCCTCCCC CGCGCCCTAC
CACACCTTCG GTACGCCGCC GGAGGTGAAG TGA
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| Protein sequence | MSAVIEPGHT AHDEHPHGPA RGPMRWVLTT NHKDIGTMYL WFSFTAFLLG GSMAMIIRTE
LFQPGLQIVQ PEFFNQMTTM HGLIMVFGAV MPAFVGLANW MIPLMIGAPD MALPRMNNFS
FWLLPAAFGL LVSTLFMEGG GPNFGWTFYA PLSTTFAPES VTFFIFAIHL MGISSIMGAI
NVIATVLNLR APGMTLMKMP LFCWTWLITA FLLIAVMPVL AGVVTMMLMD IHFGTSFFNA
AGGGDPVLFQ HVFWFFGHPE VYIMILPAFG AVSSIIPTFA RKPLFGYTSM VYATGAIAFL
SFIVWAHHMF TVGIPVTGEL FFMYATMLIA VPTGVKVFNW VSTMWRGSLT FEAPMLFAVA
FVILFTIGGF SGLMLSIAPA DFQYHDTYFV VAHFHYVLVP GAIFGIFAST YYWLPKWTGH
MYDERLARWH FWLSFVGMNL AFFPMHFVGL AGMPRRIPDY NLQFADFNMV SSLGAFLFGA
TQLLFLYIVI KCIRGGEPAP AKPWDGAHGL EWSVPSPAPY HTFGTPPEVK
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