| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_00530 |
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| Symbol | |
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| ID | 7759020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 53662 |
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| End bp | 55821 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643802979 |
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| Product | hypothetical protein with two C-terminal GGDEF motifs |
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| Protein accession | YP_002797295 |
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| Protein GI | 226942222 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.409537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGA ACTCCGTTCT TTCCGCCAAC GTCGTGCCGC CGGCCATAGA GCCGGAGAGC
ATCCGGGAGC GCTACGGCGT GCAGATGGAG GCGGCCGTGA ACCGTCGCCT GTACCGTGCC
GCGCCGCTAC CGATCATTTT GATGCTGAGC GACGGCCTGG GCTGCGTGCT GCTGCGCTGG
GAACAGCACA GCCCATCCTC TCTGGCCTGG CTGGGCCTGC TGGTCGGCCT GAGCCTGTGG
CGCATCCTCG CCTTCTTCCG GGCTCCGGCG AAGCGCCAGG CCGACCCGGG CTGGCGCTTC
ACCTTCCTGG TCGGCGCCGC GGTGTCGGGG GCGACCCTGA CCCAGACCGG CATCTTCCTC
CTGCCGCTGG CCACGCCGCT GCAACAGGCG CTGATCCATG GCCTGCTGGC GGCGGCGACC
ATTTGCGCCA GCATGGCCTA CGCGGCCAGC CTGGGCGCCT TCCTCGCCTT CGCCCTGCCC
GCCCTGTTGC CCTCCAGCCT CTATCTGCTC AGCTTCGACA GCGGCGAACT GCAGGGCTGG
GGCTGCCTCG GCCTGATCCT GCTGGCGGCT CTCGTGCTCA GCGCCTGGCA GATCAACCGG
GCGACCCGCC GCAACCTGCT GCAGCGTTAC CAGAACCGTT CGCTGCTGGA GTTCGAGAAA
CAGAGCCGCT GGGCCGCCGC CCGGCTGAAC GACGAGCTGG CGCGCGAGGT GCAGTTGCGC
AGGCGGGTCG AGGAGGAACT GCGCAGCGCG CAGAAGGCGC TGGAGGAGCG GGTCGACGAA
CGCACCCGGG CGCTCACCGC CAGCGAACGG GCGCGCCGCG AGGAAAAGGC GCTGCGCCGC
TACCTCTCCA GCCACGACCC GATGACCGGC CTGGCCAACC GCAGCCTGCT GCTGCGCCGC
CTGAAGCTTC TGGCCAGCCG CCCGCGGGTG CTCGGCCGCG AACTGGTGCT GATGCACTTC
AACCTGGATC GCTTCAAGCG GCTCAACGAA AGCCTCGGCC ATCAGCTCGC CGACGAGATC
GTCCGCGAAC TGGCCCGCCG CCTCGGCGGC AGCCTGCGCC GGGCGGACAC CGTCGCGCGG
ATCGCCGTCG ACGAATTCGC CGTGCTGCTG GATACCGACA AGAGCCTGGA GGAAGTGGAA
CAGCTCGGAC GGCGCCTGCT CACCCTGCTG CGCCATGGCG TATCGGTGGA CGAGCACGAG
GTGGTGGTCA GCGCCTCGCT GGGGATCGGC CTGCTGTCCG CGGCCGGCGG CGATCCGGCG
ACGCTGCTCT GCCAGGCGGC GATGGCCATG CGCCACGCCA AGCAGCTCGG TTGCAACACC
GTGCAGTTCT ACCGCGACAG CCTGCAGAGC AGCGGCCGCG AACGCCTGCT GCTCGAAGCG
CAGCTGGACA AGGCGCTGGG GCGCGGCGAA CTGGAGGTGT TCTACCAGCC GAAGCTGAAT
TTCGCGGCGA ACCGCCTGCA GGGCGCCGAG GCGCTGGTGC GCTGGCGCCA TCCCCAGCGA
GGCCTGGTCT CGCCGGCCCA GTTCATCCCC CTGGCCGAGG AAACCGGACA GATCGGCGCC
ATCGGCGACT TCGTCCTGTC CGAGGCCTGC AGCCAGGCGA GCGCCTGGCT GCAGGCGGGC
ATCGCCGGGC TGCGCGTGGC GGTGAACGTC TCTATGGGCC AGTTGCGCCA GGACGACTTC
GTCGAGCGGG TCGGCGCCGT GCTGGCGAGG ACCGGCCTGC CGGCGCACCT GCTGGAACTG
GAGCTGACCG AGAGCCAGTT GTCGGACGAT GTCGAGCACC TGGCCCGGGT GTTCGGCGCG
CTGCGCGCCC TGGGCGTGCG CCTGGCGATC GACGATTTCG GCACCGGCTA TTCGTCGCTC
GGCTATCTCA AGCACCTGCC GGTGAACGTG GTGAAGATCG ACCAGACCTT CATCCGCAGT
CTCGACGGCT CCGGCCGGGG CGGCGATGCG GCGATCACCC GGGCGATCAT CGTCATGGCC
CACAGCCTGG GCCTGGAGGT GGTCGCCGAG GGGGTCGAGG AGCAGGCGCA GCTCGAGTTC
CTGCGCGAGC ACGGTTGCGA CGAGATCCAG GGTTACCTGA TCGGCCGGCC GGTGGAGGCG
GCGATCCTGA CCAGCCGCCT GCACGAGCAG ACCGCGCAGC CATCCTGCGC GGTCGACTGA
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| Protein sequence | MDMNSVLSAN VVPPAIEPES IRERYGVQME AAVNRRLYRA APLPIILMLS DGLGCVLLRW
EQHSPSSLAW LGLLVGLSLW RILAFFRAPA KRQADPGWRF TFLVGAAVSG ATLTQTGIFL
LPLATPLQQA LIHGLLAAAT ICASMAYAAS LGAFLAFALP ALLPSSLYLL SFDSGELQGW
GCLGLILLAA LVLSAWQINR ATRRNLLQRY QNRSLLEFEK QSRWAAARLN DELAREVQLR
RRVEEELRSA QKALEERVDE RTRALTASER ARREEKALRR YLSSHDPMTG LANRSLLLRR
LKLLASRPRV LGRELVLMHF NLDRFKRLNE SLGHQLADEI VRELARRLGG SLRRADTVAR
IAVDEFAVLL DTDKSLEEVE QLGRRLLTLL RHGVSVDEHE VVVSASLGIG LLSAAGGDPA
TLLCQAAMAM RHAKQLGCNT VQFYRDSLQS SGRERLLLEA QLDKALGRGE LEVFYQPKLN
FAANRLQGAE ALVRWRHPQR GLVSPAQFIP LAEETGQIGA IGDFVLSEAC SQASAWLQAG
IAGLRVAVNV SMGQLRQDDF VERVGAVLAR TGLPAHLLEL ELTESQLSDD VEHLARVFGA
LRALGVRLAI DDFGTGYSSL GYLKHLPVNV VKIDQTFIRS LDGSGRGGDA AITRAIIVMA
HSLGLEVVAE GVEEQAQLEF LREHGCDEIQ GYLIGRPVEA AILTSRLHEQ TAQPSCAVD
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