Gene Avin_00250 details

Gene Information

• Locus tag: Avin_00250
• Symbol: pcoA
• ID: 7758993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 27796
• End bp: 29661
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643802952
• Product: Copper-resistance protein A precursor CopA family
• Protein accession: YP_002797268
• Protein GI: 226942195
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2132] Putative multicopper oxidases
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01480] copper-resistance protein, CopA family

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0267708
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTGCA AAACCTCGCG GCGGACCTTC GTCAAGGGGC TCGCCGCCGG CGGCGTCCTC 
GCCGGCTTCG GCCTCTGGCG CCCGCCGGTC TGGGCACTGG GCGGCCCGGC CCGGCCCGCG 
CTGCTTTCCG GCAGCGAATT CGATCTTTCC ATCGGCGAAG CCCCGGTGAA CATCACCGGC 
AAGCCGCGCA TCGCCACCGT CATCAACGGC TCCCTGCCCG GCCCCACCCT GCGCTGGCGC 
GAGGGCGACA GCGTCACCCT GCGGGTGCGC AACCGCCTGG ACGAGGACAC CTCCCTCCAC 
TGGCACGGTA TCCTCCTGCC AGCCAACATG GACGGCGTGC CGGGCCTGAG CTTCGACGGC 
ATCGCGCCGG GCGGTCTGTA CCAATACCGC TTCAAGGTGA AGCAGAACGG CACCTACTGG 
TACCACAGCC ATTCCGGATT CCAGGAGCAG ACCGGCGTCT ACGGCGCGCT GGTCATCGAT 
CCGCGCGAAC CCGAGCCCTT CCGCTACGAG CGTGACTACG TGGTGATGCT CAGCGACTGG 
ACCGACGAGA ATCCGGCGCG GGTGCTGAAG AAGCTCGAGA AACAGTCGGG CTACTACAAC 
TTCCACAAGC GCACCCTCGG CGACTTCATC GGCGATGTCG GCGAGCACGG CTGGGCGGCG 
ACCGTCGCCG AGCGCAGGGC CTGGGCGGCG ATGAACATGA CGCCCACCGA CCTGGCCGAC 
GTCAGCGGCC ACACCTACAC CTACCTGCTC AACGGCCGCT CGCCCGCCGG CAACTGGACC 
GGCCTGTTCC GTCCCGGCGA GCGGGTCCGC CTGCGGCTGA TCAACGCCGC GGCGATGACC 
TACTTCGACG TGCGCATCCC CGGCCTGAAG ATGACCGTGG TCGCCGCCGA CGGCCAGTAC 
GTCGAACCGG TGAGCGTCGA CGAGCTGCGC ATCGCCGTGG CCGAGACCTA CGACGTGATC 
GTCGAGCCGC GCGATGCCGA GGCCTACACC CTGTTCGCCC AGTCCCTCGA TCGTACCGGC 
TACGCCCGCG GCACCCTGGC GCTGCGCGAG GGGCTGGAGG CGCCGGTGCC CGAGCCCGAT 
CCGCGTCCGA TCCTGAGCAT GGCCGACATG GGTCATGGCG GCATGGAGCA TGCGGCGCAC 
GGCGGCCGGC CGGCCGGCGC GGACCACGCC GGGCACGGGA GCACGGCGCA TGCCGGCCAC 
GACGGGGCGG ACATGGATCA CGGTGGCACG AGCCATGGCG AAATGGCCGG CATGCACCCT 
ATGGAGATGA ATCACGACGA CATGGCCGGC ATGGCCCACG GCGCCATGGA GCATGCCGGC 
ACGGAGCGCG CCGCTCCGGG CATGCAGGCG CATCCGGCCT CGGAAACTGG CAACCCGCTG 
GTCGACATGC AGACCATGAC GCCCACCGCC AAGCTCGGCG ACCCCGGAAT CGGTCTGCGC 
GACAACGGTC GCCGGGTACT GACCTATGCC GATCTGCGCA GCGCCTTTGC CGATCCGGAC 
GGCCGCGAGC CGGGCCGTAC CCTCGAACTG CACCTGACCG GGCACATGGA GCGGTTTTCC 
TGGTCGTTCG ACGGCATTCC CTTCGCCGAT GCCGAGCCGC TGCGCCTGAA GTACGGCGAG 
CGGCTGCGCA TCGTGCTGGT CAACGACACC ATGATGACCC ACCCCATCCA CCTGCACGGC 
ATGTGGAGCG ACCTGGAGGA CGAGCAGGGC AATTTCCTGG TGCGCAAGCA CACCCTCGAC 
ATGCCGCCCG GATCGCGGCG CAGCTACCGC GTCACCGCCG ATGCCCTGGG CCGCTGGGCC 
TACCACTGCC ACCTGATGTT CCACATGGAG ACGGGCATGT TCCGTGAAGT GCGGGTGGAG 
GAATGA 

 

Protein sequence

MHCKTSRRTF VKGLAAGGVL AGFGLWRPPV WALGGPARPA LLSGSEFDLS IGEAPVNITG 
KPRIATVING SLPGPTLRWR EGDSVTLRVR NRLDEDTSLH WHGILLPANM DGVPGLSFDG 
IAPGGLYQYR FKVKQNGTYW YHSHSGFQEQ TGVYGALVID PREPEPFRYE RDYVVMLSDW 
TDENPARVLK KLEKQSGYYN FHKRTLGDFI GDVGEHGWAA TVAERRAWAA MNMTPTDLAD 
VSGHTYTYLL NGRSPAGNWT GLFRPGERVR LRLINAAAMT YFDVRIPGLK MTVVAADGQY 
VEPVSVDELR IAVAETYDVI VEPRDAEAYT LFAQSLDRTG YARGTLALRE GLEAPVPEPD 
PRPILSMADM GHGGMEHAAH GGRPAGADHA GHGSTAHAGH DGADMDHGGT SHGEMAGMHP 
MEMNHDDMAG MAHGAMEHAG TERAAPGMQA HPASETGNPL VDMQTMTPTA KLGDPGIGLR 
DNGRRVLTYA DLRSAFADPD GREPGRTLEL HLTGHMERFS WSFDGIPFAD AEPLRLKYGE 
RLRIVLVNDT MMTHPIHLHG MWSDLEDEQG NFLVRKHTLD MPPGSRRSYR VTADALGRWA 
YHCHLMFHME TGMFREVRVE E