Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_00230 |
Symbol | aroE |
ID | 7758991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 25683 |
End bp | 26495 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643802950 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002797266 |
Protein GI | 226942193 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.677963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGCT ACGCCGTGTT CGGCAATCCC ATCGGCCACA GCAAGTCGCC GCAGATCCAC CGCCTGTTCG CCGGGCAGAC CGGCCAGGCG CTCGGCTACG AGCCCCTGCT CGCGCCACTG GATGGCTTCG CCGGGGCGGC CCGCGCCTTC TTCGTCGACG GCAGGGGCGC CAACGTCACG GTGCCCTTCA AGGAGGACGC CTTCCGCCTG GCCGACGAAC TCACTCCCCG CGCCCGGCGC GCCGGCGCGG TGAATACCCT GATGAAGCGC GAGGACGGTA CGCTGCTCGG CGACAACACC GACGGCGCCG GGCTGGTGCG CGACCTCAGG CAGGCCGGCC TGGATCTGGC GGGATTGCGC ATCCTGCTGC TCGGCGCCGG CGGCGCGGTG CGCGGGGTGC TCGAACCGCT GCTGGCGGAG CGCCCGGCGG CGCTGGTGAT CGCCAATCGC AGCGAAGACA AGGCCAGGCA ACTGGTCGAC GAGTTCGCCG AACTCGGCCC GCTGAGCGCC TGCGGCTTCG CCGCGCTGCA GGGACCGTTC GACCTGATCG TCAACGGCAC CTCGGCGAGC CTGGCCGGCG AACTGCCGCC GCTGCCCACC GGGCTGATCC AGCCGGGCCG CGGTTTCTGC TACGACATGA TGTACGGCCG CGAGGCCACG CCCTTCTGCC ACTGGGCCCA GCAGCAGGGC ACGGCGCGAA CCCGCGACGG GCTGGGCATG CTGGTCGAGC AGGCCGCCGA ATCCTTCCAG TTGTGGCGCG GCGTCCGGCC GGACACCGCG AGCGTGCTGG CCGAACTGCG CCGGCAACTG TAG
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Protein sequence | MDRYAVFGNP IGHSKSPQIH RLFAGQTGQA LGYEPLLAPL DGFAGAARAF FVDGRGANVT VPFKEDAFRL ADELTPRARR AGAVNTLMKR EDGTLLGDNT DGAGLVRDLR QAGLDLAGLR ILLLGAGGAV RGVLEPLLAE RPAALVIANR SEDKARQLVD EFAELGPLSA CGFAALQGPF DLIVNGTSAS LAGELPPLPT GLIQPGRGFC YDMMYGREAT PFCHWAQQQG TARTRDGLGM LVEQAAESFQ LWRGVRPDTA SVLAELRRQL
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