Gene Avin_00150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_00150 
Symbolsun 
ID7758983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp17483 
End bp18814 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content72% 
IMG OID643802942 
ProductFmu, rRNA SAM-dependent methyltransferase 
Protein accessionYP_002797258 
Protein GI226942185 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGA ATCCGCGCCT GGCCGCCACC CGTGCCCTGG CCGCCGTGCT CGCCGGCAAG 
GCCTCGCTCG CCGCCCTGCC GGCGCAACTG GAGCAGGTCG CGCCGCGCGA CCGCGCCCTG
GCCCAGGAGC TGGCGTTCGG CGCCGCCCGC TGGCAGCCGC GCCTGGCGCT GCTCGCCGAA
AGGCTGCTGC GCAAGCCGCT CAAGGCCGCC GACCGGGACG TCGAGGCGCT GCTGCTGATC
GGTCTCTACC AGTTGCTGCA CACCCGCATC CCCGCCCACG CGGCGATCGG CGAGACCGTG
GCCTGCGCCG AGCAACTGAG GAAACCCTGG GCCAAGGCCC TGCTGAACGC CGTGCTGCGC
CGCGTACAGC GCGAGGGCGA GGCGCTGCTC GCCGAACTGG CGAACGATCC GGTGGCGCGC
ACCGCTCATC CGCGCTGGTT GCAGCAGGCA CTGGCGCAGC ACTGGCCGGA ACACTGGGAA
GCCATCTGCG CGGCCGACAA CGAGCACCCG CCGCTGACCC TGCGGGTCAA CCGCCGGCTG
ACCGCGCGCG ACACTTATCT CGCTACCCTG AAGGCGGCCG GCATCGCGGC CAGTGCCTGC
CGCTTCAGCC GCGACGGCAT CCTGCTCGAC GAACCGTGCG ACGTGCGCAG CCTGCCGGGC
TTCGCCGAAG GCCTGGTCAG CGTGCAGGAC GAAGCGGCCC AACTGGCCGC CTACCTGCTC
GAACCGATGC CCGGTCAGCG CGTGCTGGAC GCCTGCTGCG CGCCCGGCGG CAAGACCTGC
CACCTGCTGG AGAGCGAGCC GCGGCTGGCC GAGCTGGTCG CCATCGACCT AGAGGAAAAA
CGCCTGGCGC GGGTCCGCGA GAACCTCGAC CGGCTGGGCC TGGCGGCCCG GCTGGTCGCC
GCCGATGCGC GCGCCACCGA AGCCTGGTGG GATGGCCGGC GCTTCCAGCG CATCCTGCTC
GATGCGCCCT GTTCCGCCAC CGGAGTGATC CGCCGCCATC CGGACATCAA GCTGACCCGC
CAGGCCAGCG ACATCCCCGC CCTGGCCAGC CTGCAGGGCG AGCTGCTGGA CGCCCTGTGG
CCGACCCTGG AGGTCGGCGG CATCCTGCTC TATGCCACCT GTTCGATCCT GCCGGCGGAA
AACAGCGACA CCATCGCCGC CTTTCTCGCC CGCACCCCCG GCGCCCGCGA ACTGGACATC
GCCTCCGGCT TCGTCGGCGC CAAGCCGGGC CTGGCACAGC GCCACGGCCG CCAGCTCCTG
CCGCAGCCCC ACGGCCATGA CGGTTTCTAC TATGCCAAGC TGATCAAGAT CGCCGCCGGT
CCGCGCGGCT GA
 
Protein sequence
MSLNPRLAAT RALAAVLAGK ASLAALPAQL EQVAPRDRAL AQELAFGAAR WQPRLALLAE 
RLLRKPLKAA DRDVEALLLI GLYQLLHTRI PAHAAIGETV ACAEQLRKPW AKALLNAVLR
RVQREGEALL AELANDPVAR TAHPRWLQQA LAQHWPEHWE AICAADNEHP PLTLRVNRRL
TARDTYLATL KAAGIAASAC RFSRDGILLD EPCDVRSLPG FAEGLVSVQD EAAQLAAYLL
EPMPGQRVLD ACCAPGGKTC HLLESEPRLA ELVAIDLEEK RLARVRENLD RLGLAARLVA
ADARATEAWW DGRRFQRILL DAPCSATGVI RRHPDIKLTR QASDIPALAS LQGELLDALW
PTLEVGGILL YATCSILPAE NSDTIAAFLA RTPGARELDI ASGFVGAKPG LAQRHGRQLL
PQPHGHDGFY YAKLIKIAAG PRG