Gene Avin_00140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_00140 
SymboltrkA 
ID7758982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp16096 
End bp17469 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content66% 
IMG OID643802941 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_002797257 
Protein GI226942184 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.35944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA TCATTCTCGG CGCCGGCCAG GTCGGCGGTA CCCTGGCCGA GCACCTGGCC 
AGCGAGGCCA ACGACATCAC CGTGGTCGAC ACCGATACCG AGCGCCTGCG CGATCTCGGC
GACCGCCTGG ACATCCGCAC CATCGCCGGC AAGGGGTCCT TCCCGACCGT GCTGCGTCAG
GCCGGCGCCG ACGACGCCGA CATGCTGGTG GCGGTGACCA ACAGCGACGA AACCAACATG
GTCGCCTGCC AGGTCGCCTA CACCCTGTTC CACACCCCGA CGCGGATCGC CCGGGTGCGC
GAATCGGCCT ACCTGACCCG CGCCGGGCTG TTCAGCAACG AGGCGATTCC GGTGGACGTG
CTGATCAGCC CGGAGCAGGT GGTGACCAAC CACATCAAGC GGCTGATCGA ATACCCCGGT
GCCCTGCAGG TGATCGACTT CGCCGACGGC AAGGCCCAAC TGGTGGCGGT GCGCGCCTAC
TACGGTGGCC CGCTGGTCGG CCAGCAGCTC AGGCAGATCC GCGAGCACAT GCCGACCGTG
GACGCCCGCG TGGCGGCGAT CTTCCGTCGC AACCGGGCGA TCCTGCCCAA GGGCGACACG
GTGATCGAGG CCGACGACGA GGTGTTCTTC ATCGCCGCCA AGACCCATAT CCGCGCGGTG
ATAAGCGAGC TGCGCCGACT CGAGATCAGC AACAAGCGCA TCGTCATCGC CGGCGGCGGA
CACATCGGCG AGCGCCTGGC CGAAGCCATC GAGAGCCGCT ACCAGGTGAA GATCATCGAG
TCCAATCCGG CACGCTGCCG CTACCTCTCG GACACCCTGG ACAGCAGCAT CGTGCTGCAG
GGCAACGCCT CGGACAAGGA TCTGCTGGTC GAGGAGAACA TCAACGAGGC CGACATCTTC
CTCGCCCTGA CCAACGACGA CGAGGCCAAC ATCATGTCCT CGCTGCTGGC CAAGCGCCTC
GGCGCGCGCA AGGTGATGAG CATCATCAAC AACCCGGCCT ACGTCGATCT GGTGCAGGGC
GGCGAGATCG ACATCGCCAT CAGTCCGCAA CTGGCCACCA TCGGCACCCT GCTGACCCAT
GTGCGCCGCG GCGACATCGT CAGCGTGCAC TCGCTGCGCC GCGGCGCGGC GGAGGCCATC
GAGGCCATCG CCCATGGCGA CGAGAAGTCG AGCAAGGTGG TCGGGCGCAT GATCGGCGAG
ATCGAACTCC CGTCGGGAAC CACCATCGGC GCGGTGATCC GCGCCGAGCA GGTGCTGATC
GCCCACAACG ATACCCTGAT CGAGTCCGGC GACCACGTGA TCCTGTTCCT GGTCGACAAG
AAGCATATCC GCGACGTGGA GCGGCTGTTC CAGGTGGGAC TGGCCTTCTT CTGA
 
Protein sequence
MKIIILGAGQ VGGTLAEHLA SEANDITVVD TDTERLRDLG DRLDIRTIAG KGSFPTVLRQ 
AGADDADMLV AVTNSDETNM VACQVAYTLF HTPTRIARVR ESAYLTRAGL FSNEAIPVDV
LISPEQVVTN HIKRLIEYPG ALQVIDFADG KAQLVAVRAY YGGPLVGQQL RQIREHMPTV
DARVAAIFRR NRAILPKGDT VIEADDEVFF IAAKTHIRAV ISELRRLEIS NKRIVIAGGG
HIGERLAEAI ESRYQVKIIE SNPARCRYLS DTLDSSIVLQ GNASDKDLLV EENINEADIF
LALTNDDEAN IMSSLLAKRL GARKVMSIIN NPAYVDLVQG GEIDIAISPQ LATIGTLLTH
VRRGDIVSVH SLRRGAAEAI EAIAHGDEKS SKVVGRMIGE IELPSGTTIG AVIRAEQVLI
AHNDTLIESG DHVILFLVDK KHIRDVERLF QVGLAFF