| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_a028 |
|---|
| Symbol | |
|---|
| ID | 7409804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012040 |
|---|
| Strand | + |
|---|
| Start bp | 30763 |
|---|
| End bp | 35142 |
|---|
| Gene Length | 4380 bp |
|---|
| Protein Length | 1459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 643718723 |
|---|
| Product | putative adhesin/invasin |
|---|
| Protein accession | YP_002576152 |
|---|
| Protein GI | 222778515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACTA AAGAGGGTAA AATGAAATCA GTAATATATA AAAAATCTTT AAAAGCAAAA
TATCCAAAAA AAAGAATATT AAGAAAAATC TTGTTGTCTT TTTTGTTAAG TTCATCTTTA
ATAAATCAAA CACACTCAAG TGTTATTTTT GACAATGTAG ATAGTGAGAT TGAAATATTA
AGTAAAAAAA TTATTTCATC AACCAATACT GATAATGAAA TTTTACCTTC AAGCGCCCAA
AACACAAACA CTATTCAATC ACAAGAAACA CAAGTTAATG AAGCTAGTGA AATTATAAAA
GAAGAAAAAG ATAGTAAAGA ACTTAGTGAG CAAGAAATCT ATGCTAAATA TGCAAAAATA
AACAAAGAAA TCAGAAGTAT AGACAAAGAA TTAAGTAATA ATTCAAACAA TAATGAACTA
ATTGCTAAAA AAGAACAACT AATTCAAGAA AAAAATAATC TTGATAATAA TTTAAAAGAA
ATTAATAATG AAGAAGATAA TACAAATTTT CAAGAACAAA CTATAAGAAA AGCAAAAGTA
AAAGCTCATC GCATAATCTC TAGAGAAAAA CCAAATGTAA AAAGCAAACA AGTAGAAATT
TATAGAGAAA ATAGAATATT AGATATTGAA AATATTATAA CTAACGAAAC AGGCACTAAA
TGGGCTAAAT TAGCAAATAA AGAAGAATAT ATTTCAGCTA AGTGGCTTGA GTTTGATGAT
AAAGAAGTTA TCAAAGAACA CACTCATACT AATTTTAAAG ACAAAAAAAT TATCAAAAAA
CCTTTTGAAA CTGTTTATCT TGAAAACCCT ACAAATGCAA ATTATTATAA TGAAAATTTA
AAAACACAAA AAGCTTTAAA TGATAATAAA AAAGATAATA ATTTAAGCAA AGAAGATCAA
GAATTTTCAA ATAAAGTAAT GAAAGTTATT CAAACAGCTG GTGCTATTTA TGATAGTGAA
GATAGCAAAA GCAAAGAAGA AATTGTAAAA AATATGGCAA GTTCTTATTT AAATACAAGT
GCAAATGAAC TAGCTAAAGA ATTTATTGAT TCATTAAATA CTTCTATTAA TACAGATTTT
TCATTTAATT ACAACGAAAG AAGCGGTTTT AGTGGTAATG CTAAAGCACT TTTACCTATT
GTAAGTGAAG ATAATCCAAA AATATCTTAT TTTTTACAAA GTGGTATAGG CGAATTTGCT
AATGATAGAA CCATAGGACA CTTTGGTGGT GGTATAAGAT ATTATCCAAA CGCAACAGCT
TTAAATAATT CAGGTAATAT TATGTTAGGA TTAAACTCAG TCTATGATCA TGATTTTAGC
AGAGGGCATA AAAGAATGTC TTTGGGTGCT GAAGCTATGG TAGATACACT TGCATTTAAT
GCAAATGTAT ATCAAAGATT AAGTAGCTGG ATAGATAGCT ATGATTTTGA TAAAGATTAT
GTGCAAGAAC GCCCTGCAAA TGGCTGGGAC GCAAAAATAA AATATGCCTT TCCTTCTCTT
ATTAATGTTT CATTTTTTGC AAAAATGGGA CAATGGTATG GCAATAAAGT AGGTATTTTT
GGAGCAAATA GCGTTGATGA TTTAGAGAAA AATCCATTAA TATATGAAGG GGGAATTTCA
TATTCTCCAT TCCCTGCACT AACTTTTACT TTAAGTCATA GCAGAAGTGC AGAGAGTTCT
AAAAAGAATA CTTCAATTAA TGCAAACATT AATATACCAC TTGATGAAAA AGCTATGAAA
TTAGCATTTG AGCCAAAACT AGCAGGAATT AGTAATACTA TTGAAGGCAC TAGAACTCAA
TTTATTGATA GAGATTATTC TATGGTTCTT GAATATAGAG CAACTCCAAA TAAGTATCAT
ATTTCTTATT GTGGGGATTT AGGTAATGAT AAACATTGTA TATTGCTAAA AAATGGCTTT
GATGAAGTAG TAAAAAATAC TCCTATGAGA GTTACACCAA CTCATTCTTG TGTAGTATTT
GAAAAAGGTT TTGATTATAT TACAGACAAT AGCGGAAAAG TTTATGTGCA AATTATTCGT
TCTTGCACTC CAAAAACTGA TTTAAATGCA GTAGCTGGCG AAGCAAATGG TAAATTTCCT
ATTTCAATTA TAAAACTTGA TTTTAAAATT AAAGCAGATC CTGAAAAAAT AGAAAGATTT
GAAGAAAGTC TTATCACTTT AGCAGGTGGA AACTTAGCTA ATAATTTAAA AGTTGTTTGG
AGATTAATAG GCAAAGGTGA ATTAATAAAA ACAAATACTT CAGATACAAC TGATAACAAT
GGTGAAGCTA TTATCAAATA CAAAGCTGAT GATACTATGA AAGACAAAGA AGAAGTTAAA
GTTATTGCTA GTGTTAATGG GGTTGAGTTT AAAGCACCTG TGCAAATTAT GGTATTTGGT
AATAACGATA ATGATTTAAG CATTGATAAA GAAGTCATAG GAAATAAAGA AATAGCTATT
GCTACTTATA AAAATTTACG CCCAAATAAA ACTAATGTAA AGTGGAGATT AGATGGCGAG
GATAAAGCTT TATTCATCCT AGAAAATGAA AATAAAAGCT CTACTGCTAA AGAATTACAA
CTTATTGCAG ATAATAAAGG CGAAAGCAAA GTTAAAATCA TAGGATTGGG AAATAATGGC
AAGGTAAAAA TCTTTGCTAA AAATATTAAT GATGAATCAG TTAGCGAAAA AAACAAAGAA
TTAGAGGTTA AAAATTATAA AGCTACTATG ATTTTACCAA CACATAAACA CCCAATTACA
AATACTCCAT TTGAAAATGG AACAATTGAT TATGTGAGTG AGTTTGAAGT TAAACTTACA
GGATTAATGC CAAATACTAA AGTAGAATGG ATAGCAAAAG ATACACAGAA TAATAAAACA
TTAAGAATTA GCAATAACAA AGAAACTACT TCAAATGAAA AAGGCGAGAG TAAAGTAGTA
TTTGAAGCAA TCAAAGATTA TAATGTTAAA AATTTAGAAA TTACAGCTAT TTATAATCAA
AGTCTTGCAA ACAAAATTGA AGTTAAAGAT AATATCAAAC TTTATCAATA TTCTTTAGCA
ATGAATAGTC AAAAAGATAA GCTTGACGCT TATGAAAATG GCTTAGCTAC AAAAAATTTA
GTTTTAGATA AAACTGAAGT TAAAGTTACA GGTGGAAAGC CAAATGAAAA AGTAGAATGG
GATTTAACTG GCGATGGCAC ATTAAGTAAT CAAGAATTAA GCTTTGATCA AAATGGAGAA
GCTAAAGCTT TATTGACTTC AAAAACTCCA TTTAAAACTC CTATCAAAAT TGTTACTTCA
GGTGTAGGAA AAAATTCAAA TAAAGTTATA ACATATGATC TAAGAACATT TACACCAGTA
ATAACATATC CAGTATTTGA TTCTACTCTT TACGGCAAAC ACGAAAAAAC TATAGATTAT
GATACAGATT ATTCTATTTT AGTAAAAGGA CTTTTACCTG ATAGCATAAT AGAACCTATT
ACAAATGGAG TAATTAAACC AAAAAGCAAT AGTGTGCAAG TAAATAACAA AGGAGAAGCG
ACAATTGCTT ATCACAAGAT AAGTGATTTT AATACTAAAA AAATAAAACC ACAATTTAAA
TATATTAAAA GTGGAGATAC TAAAGAAACT TTTACTATGA ATGATATTAA TTTGTATCAA
TACAAATTAA GCATTTCAAG TGATAAAACT GAACTTGTAG GCGATGAAAT ATTTAAAGTA
ACAGTGAGAG GTGGAAAACC AAACGCAAGT GTAGAATGGA CTTTAACTGG AGATGGAAAA
ATTACCTCAA AAGATAGTAA ATTTAATGCT AAAGGCGAGG CTTATTTAAA TGGTCAAGGA
AAATCACCCT TTAATAACAG CATAAATGTG GAAGCTAAAG CTTTTAATCA AATATTAAAA
GCTAGTGCTA AAATTAGTAT TTATGAATCT AGAGGAATAT TAGCTCATCC TACAGGAAAT
AAAAATGGTG GAAATGGAAG AACTGCATTA TTAGGAAATG ATAATGGAGA AGATGGACAA
GCTTTTGGTA ATTATACAAA CGGATACTCT ATTTTTACTT TAGTAGGACA TAATGGTAAT
TTTGATTTGG GAATTTATGG ATATAAAAAT ATTGAAGATA TAAGAAATGC AAATATCAAA
ATCACCTATA CTCCTGCATA TGGAGGAAAT AAACAATGGA ATTTAAATTA TTTTATTAGT
TCAAAAATTT ATTATTTAGG AAATACATAT TTACCTTTTG ATATGAATCA TTATACTTAT
TTATTATTCA GCAAGGAAGA AGCTTCTATT CCAACTAAAC AAAACAACGG AATTTATAAG
TTTGAAGATT TAAATAATAA ATACATAAAG CCCACTTATT TGCACTTGAA ATTACCTTGA
|
|---|
| Protein sequence | MRTKEGKMKS VIYKKSLKAK YPKKRILRKI LLSFLLSSSL INQTHSSVIF DNVDSEIEIL
SKKIISSTNT DNEILPSSAQ NTNTIQSQET QVNEASEIIK EEKDSKELSE QEIYAKYAKI
NKEIRSIDKE LSNNSNNNEL IAKKEQLIQE KNNLDNNLKE INNEEDNTNF QEQTIRKAKV
KAHRIISREK PNVKSKQVEI YRENRILDIE NIITNETGTK WAKLANKEEY ISAKWLEFDD
KEVIKEHTHT NFKDKKIIKK PFETVYLENP TNANYYNENL KTQKALNDNK KDNNLSKEDQ
EFSNKVMKVI QTAGAIYDSE DSKSKEEIVK NMASSYLNTS ANELAKEFID SLNTSINTDF
SFNYNERSGF SGNAKALLPI VSEDNPKISY FLQSGIGEFA NDRTIGHFGG GIRYYPNATA
LNNSGNIMLG LNSVYDHDFS RGHKRMSLGA EAMVDTLAFN ANVYQRLSSW IDSYDFDKDY
VQERPANGWD AKIKYAFPSL INVSFFAKMG QWYGNKVGIF GANSVDDLEK NPLIYEGGIS
YSPFPALTFT LSHSRSAESS KKNTSINANI NIPLDEKAMK LAFEPKLAGI SNTIEGTRTQ
FIDRDYSMVL EYRATPNKYH ISYCGDLGND KHCILLKNGF DEVVKNTPMR VTPTHSCVVF
EKGFDYITDN SGKVYVQIIR SCTPKTDLNA VAGEANGKFP ISIIKLDFKI KADPEKIERF
EESLITLAGG NLANNLKVVW RLIGKGELIK TNTSDTTDNN GEAIIKYKAD DTMKDKEEVK
VIASVNGVEF KAPVQIMVFG NNDNDLSIDK EVIGNKEIAI ATYKNLRPNK TNVKWRLDGE
DKALFILENE NKSSTAKELQ LIADNKGESK VKIIGLGNNG KVKIFAKNIN DESVSEKNKE
LEVKNYKATM ILPTHKHPIT NTPFENGTID YVSEFEVKLT GLMPNTKVEW IAKDTQNNKT
LRISNNKETT SNEKGESKVV FEAIKDYNVK NLEITAIYNQ SLANKIEVKD NIKLYQYSLA
MNSQKDKLDA YENGLATKNL VLDKTEVKVT GGKPNEKVEW DLTGDGTLSN QELSFDQNGE
AKALLTSKTP FKTPIKIVTS GVGKNSNKVI TYDLRTFTPV ITYPVFDSTL YGKHEKTIDY
DTDYSILVKG LLPDSIIEPI TNGVIKPKSN SVQVNNKGEA TIAYHKISDF NTKKIKPQFK
YIKSGDTKET FTMNDINLYQ YKLSISSDKT ELVGDEIFKV TVRGGKPNAS VEWTLTGDGK
ITSKDSKFNA KGEAYLNGQG KSPFNNSINV EAKAFNQILK ASAKISIYES RGILAHPTGN
KNGGNGRTAL LGNDNGEDGQ AFGNYTNGYS IFTLVGHNGN FDLGIYGYKN IEDIRNANIK
ITYTPAYGGN KQWNLNYFIS SKIYYLGNTY LPFDMNHYTY LLFSKEEASI PTKQNNGIYK
FEDLNNKYIK PTYLHLKLP
|
|---|
| |