| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1538 |
|---|
| Symbol | |
|---|
| ID | 7411284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 1491628 |
|---|
| End bp | 1492932 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 643718659 |
|---|
| Product | conserved hypothetical protein (DUF814 domain protein), putative fibronectin/fibrinogen binding protein |
|---|
| Protein accession | YP_002576093 |
|---|
| Protein GI | 222824519 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA CAGATTTAAT ACAAATAAAA GATTATTTTA AACAATTCCA AAGACTAAAT
TATCTCAAAC GCCTTGATGA TAATATCTTA GAACTTAGCT TAGATCATCA AGTTTTTATA
CTAGATTTAA CGCGTGGAAA AAGTGGAATT TACCAAGATA AACTTCAAGC AAAAGTCTAT
AATGCACCTT TTGATTTTAT GTTAAAAAAA TACTTCTCTA ATGCAAAGAT TTTAAATTTA
GAAGTATTAG AAAATAATAG AATTTTATCT TTTGAAGTTT TATCAGAAAA ATCTTACAAA
GCTTATGGGG CTAAGATTTA TTTTGAATTT ACAGGAAAAA ATACCAATGT AATCATCACA
GATACTGATG ATATCATCAT AGAAGCTTTG CGTCATATAG ATAAAAGTTA CCGCATTGTA
AAAATAGGAG AAAAATTACA AGCTTTAAAA GCTTATGAGA TCAAAGAAGA ATTTGTAAAA
ATAGATGATT TTAATGTGTA CTTTAAAGAA AGTGCTAAAA AATTGCAACA AGATCGCTTA
AAGGATATTA AAGAAAATAA ACTTTTAAAT ATAGATAAAA AAATTTTTAC CCTTAAAGAG
AGTATAGAAA ATTTAGAGCA AGAAAGCGAT TTATTAAAAA AAGCACAGGA ATTAAGCCAA
AAAGCAGATG TTTTATTTGC TAATTTAAAT TTTTTAAAAG ATTATCAAAG AGAATTTATT
TTGCAAGATT TTAATGCAAA TGAGCTTGCT TTTAAGCTCG AAGATAGCCC TAAAAATAGT
GCGAATGAAT TTTATAAAAT GGCAAAAAAA TTAAAACAAA AGGCTAAAAA TATCAATATA
GAAAGAGAAA TTTTAAGTGA AAAACTTGAT TTTTTAATCA ATTTAAAAGA TTTAATCACT
AAAAGCACTT CTTTGCGAGA ATTAGAAGTT TTGATGCCTA AAAAAAGTAA AAAAACGAAA
AAAGAAGAGT TAAATGCAGG GGTTAGTAGC TTTTATTTTG ATGAGTTTAA AATCAGCGTA
GGACGCAATG AAAAAGCTAA TGAGTATTTA TTAAAAATAG CTAAAAAAGA TGATATTTGG
TTGCATGTGA AAGATTATCC TAGTGCGCAT GTAATCATCA CTTCAAATAA ATTAAAAATA
AGTCAATTAG TGCTAGAATT TGCCGCAAAG CTTTGTGTGG AATTTTCCAA GCTAAGTTCT
GGAACTTATT TGGTCGATTA TACGAGCAAG AATTTTGTTA AAGTTAGAGA GAAGGCTTTT
GTAAATTATA CAAATTATAA GACTATAAGC ATTTTAAAGG AGTGA
|
|---|
| Protein sequence | MKYTDLIQIK DYFKQFQRLN YLKRLDDNIL ELSLDHQVFI LDLTRGKSGI YQDKLQAKVY
NAPFDFMLKK YFSNAKILNL EVLENNRILS FEVLSEKSYK AYGAKIYFEF TGKNTNVIIT
DTDDIIIEAL RHIDKSYRIV KIGEKLQALK AYEIKEEFVK IDDFNVYFKE SAKKLQQDRL
KDIKENKLLN IDKKIFTLKE SIENLEQESD LLKKAQELSQ KADVLFANLN FLKDYQREFI
LQDFNANELA FKLEDSPKNS ANEFYKMAKK LKQKAKNINI EREILSEKLD FLINLKDLIT
KSTSLRELEV LMPKKSKKTK KEELNAGVSS FYFDEFKISV GRNEKANEYL LKIAKKDDIW
LHVKDYPSAH VIITSNKLKI SQLVLEFAAK LCVEFSKLSS GTYLVDYTSK NFVKVREKAF
VNYTNYKTIS ILKE
|
|---|
| |