Gene Cla_1516 details

Gene Information

• Locus tag: Cla_1516
• Symbol: typA
• ID: 7411262
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1463336
• End bp: 1465144
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 643718638
• Product: GTP-binding protein TypA
• Protein accession: YP_002576072
• Protein GI: 222824498
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATAATA TCAGAAATAT AGCCGTTATA GCTCACGTTG ATCATGGTAA AACAACTATG 
GTAGATGAGC TTTTAAAACA ATCAGGAACT TTTAGCGAGC GTGAGCAAAT AGCAGAACGC 
GTTATGGATA GCAATGATAT AGAAAAAGAA AGAGGTATTA CTATACTTTC TAAAAATACT 
GCTATTAATT ATAAAGGCAC TAAAATAAAT ATCATAGACA CTCCAGGCCA TGCTGATTTT 
GGTGGTGAGG TTGAGCGCGT TTTAAAAATG GTAGATGGGG TTTTGCTTTT AGTTGATGCT 
CAAGAAGGGG TAATGCCACA AACTAAATTC GTTGTAAAAA AAGCTTTATC TTTGGGGCTT 
AAACCTATAG TTGTGATTAA TAAAATAGAT AAACCAGCAG CTGATCCAGA GCGTGTGATA 
AATGAAATTT TTGATCTTTT TGTGGCTTTA GAAGCAAATG ATGAGCAACT TGATTTTGCT 
GTAGTTTATG CAGCTGCTAA AAACGGCTAT GCAAAATTAA ATTTAGAAGA TGATAGTTCT 
AATATGGAGC CTTTATTTAA AACCATATTA GAGCGCGTTC CAGCTCCAAG TGGTAGCGAT 
GAAAATCCTT TGCAACTTCA AGTTTTTACC TTAGGTTATG ATAATTTTGT TGGTAAAATA 
GGAATTGCAA GAATTTTCAA TGGTAAAGTG AAAAAAAATC AAAATGTGAT GCTTGCTAAG 
GCAGATGGTT CTAAAATCAA TGGAAGAATT TCAAAGCTTA TTGGCTTTAT GGGCTTAGAA 
AAAATGGACA TAGAAGAAGC TGGGACAGGC GATATTGTAG CGATTGCAGG TTTTGAAGCT 
TTAGATGTAG GAGATAGTGT TGTTGATCCA AACAATCCTA TGCCACTTGA TCCTTTACAT 
ATAGAAGAAC CAACTTTAAG TATAGTATTT TCAGTAAATG ATGGTCCTTT AGCTGGTACT 
GAAGGTAAGC ATGTGACTTC AAATAAAATA GCAGAACGCT TAGAAGCTGA GATGAAAACA 
AATATTGCTA TGAAATATGA AAGCACAGGC GAGGGTAAAT TTAAAGTTAG CGGAAGAGGC 
GAGCTTCAAA TAACTATCTT AGCTGAAAAT ATGCGTAGAG AAGGTTTTGA ATTTTGTATG 
GGAAGACCAG AAGTTATCGT TAAGGTAGAA GATGGGATAA AAACCGAACC ATTTGAACAC 
TTAGTGATTG ATGTGCCTGA TGATTTTACT GGTGTGGTTA TTGAAAAACT AGGCAAAAGA 
AAAGCTGAAA TGAAAACTAT GACTCCAACT GGAGATGGTC AAACAAGATT AGAATTTGAA 
ATTCCAGCAC GCGGGCTTAT AGGCTTTAGA AGTCAATTTT TAACAGATAC TAAAGGCGAA 
GGTGTGATGA ATCATAGCTT TTTAGAATTT CGCCCATTTA GCGGGGCAGT TGAAAAAAGA 
AATAATGGCG CGTTAATTTC TATGGAAAAT GGCGTAGCTT TGGGGTATTC TTTATTTAAT 
CTTCAAGATA GAGGAGTTTT ATTTATAGAG CCTCAAACTA AAGTTTATAC AGGTATGATT 
ATAGGCGAGC ACTCTCGTCC AAATGATTTA GATGTAAATC CTATAAAAGG TAAAAATTTA 
ACCAATGTTA GAGCAAGTGG AAGTGATGAT GCTATAAAAT TAGTTCCACC TAGAAAATTA 
AGCCTTGAAA GAGCATTAGA GTGGATAGAA GAAGATGAAC TTGTAGAAGT TACTCCACAA 
AATATTAGAG TTAGAAAAAG ATATCTTGAT CCTACTCAAA GAAAAAGAAT GGAAAAGGCT 
AAATCTTAA 

 

Protein sequence

MDNIRNIAVI AHVDHGKTTM VDELLKQSGT FSEREQIAER VMDSNDIEKE RGITILSKNT 
AINYKGTKIN IIDTPGHADF GGEVERVLKM VDGVLLLVDA QEGVMPQTKF VVKKALSLGL 
KPIVVINKID KPAADPERVI NEIFDLFVAL EANDEQLDFA VVYAAAKNGY AKLNLEDDSS 
NMEPLFKTIL ERVPAPSGSD ENPLQLQVFT LGYDNFVGKI GIARIFNGKV KKNQNVMLAK 
ADGSKINGRI SKLIGFMGLE KMDIEEAGTG DIVAIAGFEA LDVGDSVVDP NNPMPLDPLH 
IEEPTLSIVF SVNDGPLAGT EGKHVTSNKI AERLEAEMKT NIAMKYESTG EGKFKVSGRG 
ELQITILAEN MRREGFEFCM GRPEVIVKVE DGIKTEPFEH LVIDVPDDFT GVVIEKLGKR 
KAEMKTMTPT GDGQTRLEFE IPARGLIGFR SQFLTDTKGE GVMNHSFLEF RPFSGAVEKR 
NNGALISMEN GVALGYSLFN LQDRGVLFIE PQTKVYTGMI IGEHSRPNDL DVNPIKGKNL 
TNVRASGSDD AIKLVPPRKL SLERALEWIE EDELVEVTPQ NIRVRKRYLD PTQRKRMEKA 
KS