| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1451 |
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| Symbol | |
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| ID | 7409958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1391333 |
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| End bp | 1393276 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643718573 |
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| Product | BCCT (betaine/carnitine/choline) family transporter |
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| Protein accession | YP_002576018 |
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| Protein GI | 222824444 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000418555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAA CAAGTTTTAA AAAGGCAGTA TTTTTACCAA GTATTAGTAT TATAGTTGTT
TTAAGCCTTA GTTGTATTTT CTTGCCTAAA CTTACAAATG ATTTTATCAA TCATATAAAA
AGTGGAATTT TTGCAAATTT TTCATGGTTT TATATATTAA GCGTGAGTTT TTTTGTGTGT
TTTATGCTAG CACTTGCTCT TTCAAAATTT GGCGATATCA AGCTCGGCGA TGATGATGAA
AAACCTCATT TTAAATTTAC TTCTTGGCTT GCTATGCTTT TTGCTACGGG TATGGGTGTG
GGGCTTATGT ATTTTGGTGT GGCTGAGCCT CTTATACATA AAAAAGCCTT GCAAATAAGC
GATGAGGAGG CTATGCTACA TACTATCTTT CACTGGGGAA TTCACCCATG GGCTATTTAT
GGGGTGTGTG CTTTGGCTAT GGCGTATTTT GGTTTTAGAT ATAAAATGCC TCTTAGCTTG
CGTAGCGCTT TTTACCCTTT GCTTAAAGAC AAAATTTATG GTTTTTGGGG AAATTTAGTC
GATATGCTAG CTTTGATTGT CACGGTTTTT GGTATTAGCA CTACGCTTGG TTATAGTGCT
TCTCAGCTTA ATGCTGGCTT TTTAAATTTA GGCATTTTAA ACGAACAAAG CTTTTTAGAA
CAAAGTGTGA TTATAATTAT CATCATTTCT TTAGCTACGC TTTCATCGAT TAGTGGTTTG
ACAAAGGGCT TAAAAATTTT AAGTGAGGCA AATTTGGTTT TTGCAGTGTG TTTAATGCTT
TTTGTGCTTT TTTCAACTAG CACCATTCAA ATTCTTTCAC AATTTAGCTC TAATATTGGC
AATTATTTAC AAAATTTAAT TTCTTTGAGT TTTAAGACTT ATTATTATGA AAAAGAGCAT
ATAGAGTGGT TTAATAATTG GACTATTTAT TATTGGGCTT GGTGGCTTAG TTGGTCGCCT
TTTGTGGGCT TTTTCATCGC TAAAATTTCT CGCGGTAGAA CGATAAGGGA ATTTATCTTT
GGCGTGCTTG TAGTGCCTAC TAGTTTTAAT ATACTTTGGT TTAGCATTTT TGGTAATAGT
GCTTTAAATT TTAATGATAT TTTAAGTCCT TTTACTTCAG CACCTGAAAG TTTGCTTTTT
TATTTTTTAC AAAATTTTTC TTTTTCTTAT TTTAGTTCTT TGCTTGCACT TTTGGTTTTA
GCTTTGTTTT TTATCACTTC AGCAGATAGT GGGATATTTG TGTTAAATTC TTTAAGTAGT
GGCGGGGCTC ATGAGCCATT CAAATGGCAA AATATCCTTT GGGGTTTTGT GCTTGCACTT
TTGGCTACTT CTTTGCTGTA TTCAGGTGGT TTAGGGGCTA TTTTAAGTAT CACTATGATA
GTGGCTTTGC CTTTTGCCTT TTTACTTTGT TTGATGTGTT TTTCACTGCT TAAAGGTTTA
ATCGTAGATG TAAATTACTC TTTAACTAAA CTTAGTCAAA GTAGCGTGTA TTTTTCAGGG
GAATTTTGGC AAGAAAGACT AGCTAGAATT TTAAAACAAA GCAAAGAACA AGATATACAA
AATTTCTTAA ATGCTAAAGT TAAAAATGCT ATGGAATCAC TCAGCCAAAG CCTAAAAAAC
TACGGCTTAA AAACACAAAT TGTTCAAGAA AAATCAAGCA TAAGTTTGAT TATAAAAAAA
GAATTTGCAA AAGATTTTAT CTATGGAGTG CAAGTAGTAA AAAAACAAGC AAGTCAAAGC
ATAATTGATG ATAAATTTAT GCCAACTTAT TCTAAAGAAT TTATTTTTGA GCCACAAACT
TTCTTTGCTG ATTCGCGTAA TGGTTATAAT ATAGAGTATT TAAACGAGCA AGAAATTATC
GTAGATATAC TAAAGCAGTA TGAGAGGTAT TTGCAACTTT TATTTGATGA TAAAAATGAA
ATTTTTACCA AAGCTTATGA TTAA
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| Protein sequence | MLKTSFKKAV FLPSISIIVV LSLSCIFLPK LTNDFINHIK SGIFANFSWF YILSVSFFVC
FMLALALSKF GDIKLGDDDE KPHFKFTSWL AMLFATGMGV GLMYFGVAEP LIHKKALQIS
DEEAMLHTIF HWGIHPWAIY GVCALAMAYF GFRYKMPLSL RSAFYPLLKD KIYGFWGNLV
DMLALIVTVF GISTTLGYSA SQLNAGFLNL GILNEQSFLE QSVIIIIIIS LATLSSISGL
TKGLKILSEA NLVFAVCLML FVLFSTSTIQ ILSQFSSNIG NYLQNLISLS FKTYYYEKEH
IEWFNNWTIY YWAWWLSWSP FVGFFIAKIS RGRTIREFIF GVLVVPTSFN ILWFSIFGNS
ALNFNDILSP FTSAPESLLF YFLQNFSFSY FSSLLALLVL ALFFITSADS GIFVLNSLSS
GGAHEPFKWQ NILWGFVLAL LATSLLYSGG LGAILSITMI VALPFAFLLC LMCFSLLKGL
IVDVNYSLTK LSQSSVYFSG EFWQERLARI LKQSKEQDIQ NFLNAKVKNA MESLSQSLKN
YGLKTQIVQE KSSISLIIKK EFAKDFIYGV QVVKKQASQS IIDDKFMPTY SKEFIFEPQT
FFADSRNGYN IEYLNEQEII VDILKQYERY LQLLFDDKNE IFTKAYD
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