Gene Cla_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1240 
Symbol 
ID7410973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1192930 
End bp1194135 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content23% 
IMG OID643718365 
Productglycosyltransferase 
Protein accessionYP_002575811 
Protein GI222824237 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000212379 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG TAGGCGTAGT AATCCCCATA TATAATGTAG AAAAATATCT AAAAGAATGT 
TTAGATAGTG TAATCAATCA AACTTATACT AACTTAGAAA TCATACTTGT AAATGATGGT
AGTACAGATG AAAACTCACT TAATATTGCA AAAGAATATA CTCTAAAAGA TAAAAGAATC
ACTCTTTTTG ATAAGAAAAA TGGTGGACAA AGTACAGCTA GAAATATAGG TATAGAATTT
TTTAGTGGAG AATATAAACT CAAAAACAAA ACTCAAACTA TAAAAGAAAA TTCTTTAATA
GAATTTAATA TAGAAGGTAA TAATCCTTAT GAAATATATA CTGTATATAA AAGCTATAAA
GCTTTTAATA ATGAACAAGA TTTAACTAAC CTTACTTATC CTATTATAGA TTATATTATC
TTTTTAGATT CTGATGATTA TTGGGAATTA AACTGCATAG AAGAATGTGT ACCTAGAATG
GATGGGGTTG ATGTGTTGTG GTTTAAAGAA AAAATTTTAA ATGAAACTAA TCTTGATATT
AATACACAAA CTATATTTGA AAAATATTAC TTAAAAAATA TTATTACAAA TACAGAATGG
ATTGAGATAC AATCAAAAAA AGATAATTTT TTTCAGTTTG TATGTTTTGG AATGATAAAT
TTTGCACTTC TTAAAAAAAT AAAATTATCA TTTAAAGATA ATATTATTGG AGAGGATAGG
GTTTTTGGGA TTTTACTATT TTTACAATGT AATAAAATTT ATATGCTTGA CTTGGAGCTA
TATTTTTATA GAATCAGAGA AAATTCAACA TGTAACTATA CAAATACTGG CGATAGTTTT
TCACGTTATC ACCTACAACT ATTTTCTGGT GGAAAAAACA TAAAAAGACA TATTCGTATT
TATTCACACA TCAAAATACT ACTAGCACTA ATAAAGTATT GCAAAAAATC CAATAATCAA
GCCGGTATAG AAATATGCAG AAAAATTTTT ATACCATCAT TTTATAATAG TATTAAAAAA
GATTATTTAA AATGTGAAAA AGTTAACACT AGATATAAAT ATATATTTAT AAATCTCGAT
AAGCACTGGA TTGAATTTTG TGGTAATAAA TCAAAAAACT TATTTTTTTT AAAAAATAAG
TTTTTGTTTA ATTTTTTTAT TTTATGTTAT ACTATTATAT TTAGATTTAA ATTACCAAAA
AGATAA
 
Protein sequence
MKTVGVVIPI YNVEKYLKEC LDSVINQTYT NLEIILVNDG STDENSLNIA KEYTLKDKRI 
TLFDKKNGGQ STARNIGIEF FSGEYKLKNK TQTIKENSLI EFNIEGNNPY EIYTVYKSYK
AFNNEQDLTN LTYPIIDYII FLDSDDYWEL NCIEECVPRM DGVDVLWFKE KILNETNLDI
NTQTIFEKYY LKNIITNTEW IEIQSKKDNF FQFVCFGMIN FALLKKIKLS FKDNIIGEDR
VFGILLFLQC NKIYMLDLEL YFYRIRENST CNYTNTGDSF SRYHLQLFSG GKNIKRHIRI
YSHIKILLAL IKYCKKSNNQ AGIEICRKIF IPSFYNSIKK DYLKCEKVNT RYKYIFINLD
KHWIEFCGNK SKNLFFLKNK FLFNFFILCY TIIFRFKLPK R