| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1236 |
|---|
| Symbol | |
|---|
| ID | 7410969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 1189797 |
|---|
| End bp | 1190687 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 23% |
|---|
| IMG OID | 643718362 |
|---|
| Product | formyltransferase, putative |
|---|
| Protein accession | YP_002575808 |
|---|
| Protein GI | 222824234 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000000369668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AAGTGTTAAA TATAGGTTAT TTTGCTGATG GAAAATGGGG GTTAAATTGT
TTTAAACAAA TTATTCATTC TAAAAAAATA AGTATTAAAT TTGTTGTTTT GAGATATGCT
AATCCTGATT TAAAATTGAT GAAATTAGCC AGAAAAAAAT ATATTGATTG TTATATTGAG
CAAGATGTTA ATCATTATAG TTTTATAGAA AAAATTTCTA AATATAATGT TGATTTGCTA
GTTTCTATGA GTTTTGATCA AATTTTTAAA CAACCTATAT TGGATTTATA TAAAAATAAG
ATTATTAATT GCCATGCAGG AAAATTACCA GAATATAGAG GAAGAAATAT ATTAAACTGG
GCGCTTATTA ACGGTGAAAA AGATTTTGGT ATCACCGTTC ATTTTGTGAA TGAAAAAATA
GATGATGGGG ATATAATTTT ACAAAAAATT TTAAAAATTA AAGAAAATTA TAATTATAAA
ATGCTACTTA AAATATCGGC TGTTGAATGT TCAAGATTGC TTTTTGATGC TTTAAAATTA
TTTGTAAATA ACAAAGTTAC ATCATATAAG CAGAATTTAA AAAATGGTTT TTATTGTAAA
AGAAGAAAAA GCGGCGATGA AATTATTAAT TGGAATGATA AACGTGTAAA TATACATAAT
TTTATCAAAG GTGTAAGAGG GGGGGGGATT AGTGCTATAA GCTATATTCA ATCAAATAAA
ATTAAAATTT TTAAAAGTGA AATAGTTGAC ATGTACATGG GAAATAAAAA AAATGGCGAA
GTGGTAAAAG CAAATAAAAA ACACATATAT ATAAACACTA TAGATGGAAT CTTAAAAATT
ATATCATACA AAGCAGATAT TCTTATATCT AAAGGTGATA TATTAAATTA A
|
|---|
| Protein sequence | MKNKVLNIGY FADGKWGLNC FKQIIHSKKI SIKFVVLRYA NPDLKLMKLA RKKYIDCYIE
QDVNHYSFIE KISKYNVDLL VSMSFDQIFK QPILDLYKNK IINCHAGKLP EYRGRNILNW
ALINGEKDFG ITVHFVNEKI DDGDIILQKI LKIKENYNYK MLLKISAVEC SRLLFDALKL
FVNNKVTSYK QNLKNGFYCK RRKSGDEIIN WNDKRVNIHN FIKGVRGGGI SAISYIQSNK
IKIFKSEIVD MYMGNKKNGE VVKANKKHIY INTIDGILKI ISYKADILIS KGDILN
|
|---|
| |