Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1231 |
Symbol | ptmE |
ID | 7410395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 1184993 |
End bp | 1186030 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 643718357 |
Product | flagellin modification protein PtmE, putative sugar-phosphate nucleotide transferase |
Protein accession | YP_002575803 |
Protein GI | 222824229 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00000208573 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGGCTA AAATTGATGA ATTAAAATTA AGAGCAAATT CTAGCATTAA AGATGCATTA AATATCATAG GAAAATTAAG AGTTAGGCTT GGCATTGTTG TAGATGAAAA TGATGATTTA TTAGGAATTA TTAGCGATTC AAATATTAGA AAAGCTTTAT TAAATGGATA TGATTTAAAT GAAAGTATAG AAAAAATTTA TACTAAAAAT CCTATATTAG TTAGTGAAAA AACTAGCGAA AAAGATTTAT TAAAATTAAG TGCTAAATAT GATATATATG ATTTTCCAAT AATAAATAAA AATGGAAAAA TTATAAAAAT AAAATCCATT GCCTCTTTAC TTTGTAAAAA CAAAAATCCA AATTATGTTA TTTTAATGGC AGGAGGTTTG GGAACTAGAT TAAAAGAACT TACCAAAAAT ACTCCAAAAC CTATGTTAAA AGTAGGCAAT AAACCTATAC TTGAAACTAT AATTTCAAAA TTTAATGAGC AAAATTTTGA AAATTTTATT TTTTGTGTAA ATTATAAAAA ACATATGATT AAAAATCATT TTAAAAATGG TGAAAAATTT GGAGTAAATA TAAAATATGT TTGTGAAAAT AAAAAGCTTG GCACAGCTGG GGCTTTGAGT TTGATAAATA AAGATTTAAA AGATAGTTTT ATAGTGATGA ATGCTGATAT TTTAACTGAA CTTGATTTTA ACAAATTATT AAAAGCACAT AAAAAAAGCA AAGCATTAAT GAGTGTGGTT CTTAGAGAAT ATAATCATCA AATTCCATTT GGCGTAGTAG AATTAAAAAA TAAAAGTATA GTAAAAATTA CAGAAAAACC TACGCAAAAA TTTTTAATAA GTGCTGGAAT ATATGTTTGT GAACCTTGTG TTTTAAATCT TTTAAAAGAA AATGAATACC TTGATATGCC AAATTTAATA GAACTTATTA TGCAAAAAGG TAAGGTAAAT TCATATATGC TTGATGATTA TTGGATTGAT ATAGGAAGAA TGGATGAGTT TTTAAAAGCA AATAAGGAAT TTAAGTGA
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Protein sequence | MKAKIDELKL RANSSIKDAL NIIGKLRVRL GIVVDENDDL LGIISDSNIR KALLNGYDLN ESIEKIYTKN PILVSEKTSE KDLLKLSAKY DIYDFPIINK NGKIIKIKSI ASLLCKNKNP NYVILMAGGL GTRLKELTKN TPKPMLKVGN KPILETIISK FNEQNFENFI FCVNYKKHMI KNHFKNGEKF GVNIKYVCEN KKLGTAGALS LINKDLKDSF IVMNADILTE LDFNKLLKAH KKSKALMSVV LREYNHQIPF GVVELKNKSI VKITEKPTQK FLISAGIYVC EPCVLNLLKE NEYLDMPNLI ELIMQKGKVN SYMLDDYWID IGRMDEFLKA NKEFK
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