| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1226 |
|---|
| Symbol | waaF |
|---|
| ID | 7410390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 1180872 |
|---|
| End bp | 1181786 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643718352 |
|---|
| Product | lipopolysaccharide heptosyltransferase II |
|---|
| Protein accession | YP_002575798 |
|---|
| Protein GI | 222824224 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1.56987e-17 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTT TTATAAATTT GCCTACTTGG CTTGGTGATG CGGTGATGGC AAGTGCGGCT
ATTTATGCTA TAAAAGAAAA ATATCCCCAA GCTAAATTTA CTTTTTATGG TTCTTTTGTG
AGCACAGAGC TTTTTAAACG CTTTGAAAAT GCTCAAATTT TAGTAGAAAA TAAAAAGCAA
AGATATAGAC AAATTTTAAA AGCTAGAAAA AATCTTGGTA AATTTGATCT AGCTTTTTCA
TTTCGCTCGG CATTTTCAAG CAAGATTATT TTAAATCTAA TCAAAGCAAA AAAAAGATTT
TACTTTGATA AAAATATTCT AAAAGAAGAA CACCAAGTCT TAAAATACTT AGATTTCATA
GAAAAAGCCT TAAATTTTAA AGCCACTTCA AATGCTTTAA AACTCCCTAT AAAAGCAAAA
TCTACTAAAA AAATTCTAGG CATAAATGCT GGGGCTCATT ATGGAAGTGC AAAAAGATGG
GAGGCAAGCT ATTTTGCAAG GGTAGCAAAA GAATTTAGCT CAACTCATCA AATTTTAATC
TTTGGAGTAG AAAGTGAGAG AGAAATTTGT GATGAAATTG AGTATTTTCT TCTAAAAGAA
GGTATCAAAT CAAAAAATCT TTGTGGTAAA ACTAGTATTT ATACTTTATG TAAAAATATT
TCTATGCTTG ATTTACTCAT CACAAACGAT AGTGGTCCTA TGCATATAGG TGCAGTTTAT
AGGGTAAAAA CGGTGGCCGT TTTTGGCTCG ACTAAATTTA GTCAAACCTC GCCTTGGCAA
GAAAATGCTA AAATAGCACA TTTAAATTTA GCTTGTATGC CTTGTATGCA AAAGGTCTGC
CCTTTAAAAC ACCACAAATG CATGAAAGAT TTAAAGCCTG AAGTGGTAAT AAATCTAGCA
AAAACATTTT TTTAG
|
|---|
| Protein sequence | MRIFINLPTW LGDAVMASAA IYAIKEKYPQ AKFTFYGSFV STELFKRFEN AQILVENKKQ
RYRQILKARK NLGKFDLAFS FRSAFSSKII LNLIKAKKRF YFDKNILKEE HQVLKYLDFI
EKALNFKATS NALKLPIKAK STKKILGINA GAHYGSAKRW EASYFARVAK EFSSTHQILI
FGVESEREIC DEIEYFLLKE GIKSKNLCGK TSIYTLCKNI SMLDLLITND SGPMHIGAVY
RVKTVAVFGS TKFSQTSPWQ ENAKIAHLNL ACMPCMQKVC PLKHHKCMKD LKPEVVINLA
KTFF
|
|---|
| |