Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1207 |
Symbol | gatB |
ID | 7410371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 1161538 |
End bp | 1162956 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643718333 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_002575779 |
Protein GI | 222824205 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAG TTGTTATAGG ACTTGAAGTT CATGCACAAT TAAATACAAA AACAAAAATC TTTTGCTCAT GTGCAACTTC TTTTGGAGAA AAATCAAATA CTAATGTATG TCCAACATGT TTAGCTTTAC CAGGTGCTTT GCCTGTATTA AACCAAGAAG CAGTGAAAAA AGCTATAGCA TTTGGAAAAG CAGTTAATGC AACTATAAAT AAAAAAAGTA TTTTTAATAG AAAAAATTAT TTTTATCCTG ATTTGCCAAA AGCTTATCAA ATTTCGCAAT TTGATATTCC CATAGTAGAA AATGGAGAAT TGTTTATTAA TATAAATGGA GAAAATAAAC GCATAGGTAT TACTAGAGCT CACTTAGAAG AAGATGCAGG GAAAAATATA CACGAGAGTA ATTTTTCAAA AGTAGATTTA AATAGAGCAG GCACACCTTT GCTTGAAATC GTTAGCGAGC CTGAACTTAG AAGTTCTGAT GAAGCAGTGG CTTATTTAAA AAAGCTTCAT TCTATTATAA GATTTTTAGA TATTTCAGAT GCAAATATGC AAGAAGGTAG TTTTAGATGC GATGCTAATG TAAGTATTCG CCCAAAGGGT GATGATAAGC TTTATACCAG AGTAGAGATT AAAAACTTAA ATTCATTCCG TTTTATCCAA AAGGCGATTG AGTATGAAGT AAAACGCCAA AGTGAAGCTT GGGAAGATGG AAAATACGAT CAAGAAGTTG TACAAGAAAC AAGATTATTT GATACGGTTA ATTTGGTTAC TAGAAGTATG AGAGGCAAGG AAGATTCTGC CGAATATAGA TATTTTCCTG ATCCTGATCT TTTACCTGTA ATGTTAGATG ATGAAATGCT AAGTCAAGAT ATACCTGAAC TTCCTGATGA GAAAAAAGCT AGATTTGTTA GTGAGTTAGG TATTAAAGAA AGTGATAGTG AAGTGATTGT TTCTTCATTA GAGCTTTGTA GATATTTTGA GTATTTAATT GATCAAAAAT TAAACCCAAA ACTTTGTGTT ACTTGGCTTA CGACTGAGTT AATGGGACTT TTAAAAGGTG AGTTAACTAT AGAAAACTCA CCTATAAAAC AAGAAAAACT AGCTATTTTA ATCAAACGCA TAGAAGAAGG TGTTATTAGT GCTAAAGCAG CTAAGGATAT TTTAGCTTAT GTGTTTGAAA ATACCCAAGC TCAAATCGAT GATGCTATTG AAAAACTTGG TTTAAAACAG GTCAGTGATG ATGGTGCTAT TGAAAAGATT ATTGATGAAA TTTTAGCAAA CAATGAAGAT AAAGTGGTTG AATATAAAAG TGGTAAAGAT AAACTTTTTG GTTTCTTTGT CGGTCAGGTA ATGAAAGCAG GTAAGGGTGC ATTTAATCCT GCTAAGGTAA ATGAAATTTT AAAAGCAAAA CTTGGTTAA
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Protein sequence | MFEVVIGLEV HAQLNTKTKI FCSCATSFGE KSNTNVCPTC LALPGALPVL NQEAVKKAIA FGKAVNATIN KKSIFNRKNY FYPDLPKAYQ ISQFDIPIVE NGELFINING ENKRIGITRA HLEEDAGKNI HESNFSKVDL NRAGTPLLEI VSEPELRSSD EAVAYLKKLH SIIRFLDISD ANMQEGSFRC DANVSIRPKG DDKLYTRVEI KNLNSFRFIQ KAIEYEVKRQ SEAWEDGKYD QEVVQETRLF DTVNLVTRSM RGKEDSAEYR YFPDPDLLPV MLDDEMLSQD IPELPDEKKA RFVSELGIKE SDSEVIVSSL ELCRYFEYLI DQKLNPKLCV TWLTTELMGL LKGELTIENS PIKQEKLAIL IKRIEEGVIS AKAAKDILAY VFENTQAQID DAIEKLGLKQ VSDDGAIEKI IDEILANNED KVVEYKSGKD KLFGFFVGQV MKAGKGAFNP AKVNEILKAK LG
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