| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1041 |
|---|
| Symbol | |
|---|
| ID | 7410775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 995698 |
|---|
| End bp | 996606 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643718167 |
|---|
| Product | peptidase, M23/M37 family |
|---|
| Protein accession | YP_002575614 |
|---|
| Protein GI | 222824040 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 0.432604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA AATTTACGCT AACTATCACA GATGTAAATG GTTCTAGACA TTTTTTATTA
AGTCAGATCA TAAAAAAAGT AATTATTTAT TTTACTACTT TTGTTTTTGT TGTTATAGTT
TTGGGTGCTT TGTATATTAA TTATTTAGCG ACTAAGCGTT CAGAGCTTCT AAAAGAGCAA
GAAACATTGT CAGCAAAAAA TACTAAATTA TTTTCACAAA ATGAAAGTAT GCAAAAAAGT
CTAGATGAAA AAACAGCCTT GTATGATGAG CTTCAAACTC AACTTGCAGA TATTGAAGAA
AATTTAGGTT TAAAGCAAGA TGAGGGTTTA GATATACCAG AAAGATTGGA AAAAGTTAAA
CTTACTAACG ATCAAGCCTA TTTATTTTTA ACACAAATTC CAAATGGCCA TGTGATAGAA
GATAATGGAA TTACAGGTAA TTTTGGATGG CGTCATCATC CTATATTAAA TAAAAAAGAG
TTTCATCCAG GCATTGATTT AAGAGCAGCT TTAAATACTC CCATTTATGC ACCGGCAAAT
GGAGTGGTTG AATATGCTGC ATATAGTAAT AACGGTTATG GTTATTCAGT GATTTTAATC
CATAATTTTG GCTTTAAAAC AGTATATGCA CACATGATGC GCAAAGATGT TGTTAAAGCA
GGGCAATTTG TAAAAAAAGG TGATTTGCTT GGATATACAG GCAATACCGG TCTTTCTACG
GGGCCACATT TACATTATGA GGTTAGATTT ATTAATAAAC TTTTAGACCC TAAAATTTTT
ATAGATTTAA ACAAAAAAAA TTATGAACAA ATATTTGATA AAGAAAGGAG AGTTCCATGG
CAATCTTTAA TAAAGGCTCT ATTGCTACAG TATCCGAAAC TACAGTCATT TCAAACGGAG
CAAAAATAG
|
|---|
| Protein sequence | MKDKFTLTIT DVNGSRHFLL SQIIKKVIIY FTTFVFVVIV LGALYINYLA TKRSELLKEQ
ETLSAKNTKL FSQNESMQKS LDEKTALYDE LQTQLADIEE NLGLKQDEGL DIPERLEKVK
LTNDQAYLFL TQIPNGHVIE DNGITGNFGW RHHPILNKKE FHPGIDLRAA LNTPIYAPAN
GVVEYAAYSN NGYGYSVILI HNFGFKTVYA HMMRKDVVKA GQFVKKGDLL GYTGNTGLST
GPHLHYEVRF INKLLDPKIF IDLNKKNYEQ IFDKERRVPW QSLIKALLLQ YPKLQSFQTE
QK
|
|---|
| |