| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0947 |
|---|
| Symbol | |
|---|
| ID | 7410527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 906830 |
|---|
| End bp | 907897 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 643718075 |
|---|
| Product | conserved hypothetical protein, polysaccharide deacetylase domain protein |
|---|
| Protein accession | YP_002575522 |
|---|
| Protein GI | 222823948 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAACTA TAAATAAAAA ACACAAAGTG CTTTTAGCGC TTTGTTTGGT TGTGTTTGGA
ATTTTTCTTT TTGCATTTGG GGCTTTGTTT TTAAAAAAAG AAGAAAATAA AGTTTTAGAT
TTCAATCAAA CCATAATTAA AAAAGAACCA TTATCACCTA CAATAGAGCA AGAAAATAAT
TTTAGTTTTA ATGATATAAA TTTGACTTTA GAAAATGAAA ATTTAGATTT TTCAGATAAA
AATATTAGTG AAATTTTGAA CTTAAACCCT ATAGATACAG AGTTAAATCA AACTAAAGAG
GATAATCAAA CTTCAATTTT AGAAGTAATA GATCAAAATA CAAGTAAAGA ATTAAACAAC
GAAGAGCAAA ATATATCAGA TAAAAACGAG GGCAATAAAA CTCAAATCCT AGTGCAAAAA
AATACCAAAC CTCGTCTAGC AATTATTATA GATGATATGG CAAGTCACAC TCATGTAGAT
ATGCTTAAAA AAACAAATTT AAAATTAATC CCATCTTTTT TTCCACCTGA TAAACGCCAC
CCTTATACAG CAGAGTTTGC AAAGGATTTT GACTTTTTTA TGGTGCATTT ACCCCTTGCT
GCTATAAAAT ATGACAAGGC AGAATTAAAC ACTTTACACC CTGGTGATGA TATGCAAAAA
ATAGGTAAGC GTGTAGCTTT TGTAAAAGAA CAATTTCCAA AAGTAAAATT TATTAATAAT
CATACAGGAA GTTTATTTAC TGCAAATAAG CAGGCTATGG AAAAATTATT TAGTGCTTTT
AAACAAAACG ATTTTGTTTT TGTTGATTCA AGAACCATAG GAAAATCTAA AGCTAAAAAT
TTAGCAAGTC AATTTAATCA GCCTTATATA GCTAGAGATG TTTTTTTGGA CAATGAAGAT
GATATAGTGT ATATTAAAAA TCAACTCAAA CAAGCAGTAG AAGAGGCAAA AAAGAAAGGT
TTTGCTATTG CTATTGGTCA TCCAAGAGAA AAGACTTTTA AAGCTTTGGT GCAAAGTAAA
GAATTGTTAA ATTCAGTTGA GCTTGTGTAT TTAAATGAAA TTTATTGA
|
|---|
| Protein sequence | MKTINKKHKV LLALCLVVFG IFLFAFGALF LKKEENKVLD FNQTIIKKEP LSPTIEQENN
FSFNDINLTL ENENLDFSDK NISEILNLNP IDTELNQTKE DNQTSILEVI DQNTSKELNN
EEQNISDKNE GNKTQILVQK NTKPRLAIII DDMASHTHVD MLKKTNLKLI PSFFPPDKRH
PYTAEFAKDF DFFMVHLPLA AIKYDKAELN TLHPGDDMQK IGKRVAFVKE QFPKVKFINN
HTGSLFTANK QAMEKLFSAF KQNDFVFVDS RTIGKSKAKN LASQFNQPYI ARDVFLDNED
DIVYIKNQLK QAVEEAKKKG FAIAIGHPRE KTFKALVQSK ELLNSVELVY LNEIY
|
|---|
| |