Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0909 |
Symbol | |
ID | 7410489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 867871 |
End bp | 869235 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643718038 |
Product | sodium-dependent transporter (SNF family) |
Protein accession | YP_002575485 |
Protein GI | 222823911 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.45649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGAC AAACTTGGAG CAATACGCTA ACTTATATCC TTACAGTAGC AGGAGCGACT ATTGGTTTTG GAGCCACTTG GCGTTTTCCA TACTTAGTAG GTGAAAATGG AGGCGGTGCT TATGTTTTAG CTTTTTGTAT AGCTATGATT TTTATAGGAA TTCCTGTGAT TTTGGTTGAA AATGTCATAG GAAGACGTAG AATGCAAAAT TCAGTCGATG CTTTTGGCGG AAAAACAAGC GATGGGGTTA AAATATCTAA TTCTTGGCAA GGTGTTGGCT ATATGGGACT TTTAGGTAGT TTTGGAATTA TGGCTTATTA TATGGTAATA GGCGGATGGG TTTTGGCTTA TATTTTTAAA ATCATCATAG GCGATTTTAA CCTTTCAAAC CCCATTAATG CTCAATATAC AAGCGAATTT TATAGCTCTA CTATAGAAAA TAATCCTTTA TTAATAGGAA TTTTTACTAC TATATTCGTG ATAATTAACT GGATTATCTT AAAAAAAGGT GTGATTGATG GCATAGAAAA GTCAGTAAAA TACCTTATGC CATTTTTATT TATCTGTCTT TTGGTTGTTG TTGCGCGTAA TTTAACACTT GAGGGAGCAA GCGAGGGCGT GAAATTTTAC CTTACTCCTG ATCTTTCCAA AATCACTCCT AAATTGTTTA TAGACGTTTT AGGGCAAGTA TTTTTTGCCT TATCTTTGGG TTTTGGTGTA ATGATAACCT TATCTTCTCA CCTTAAGAAA AATGAGAATT TAATCAAAAC TTCTGTTTAT ACAGGAATTT TAAATACTCT CATAGCAGTA CTTGCTGGTT TTATGATTTT CCCTGCTTTA TTTAGCGTAG GTTTAACCCC TGATAGCGGG CCATCTTTGG TTTTTAAAAC CTTGCCTGTT GCATTTTCAC ATATACCTTT TGGAAATGTA ATTTGTGTGT TTTTCTTTTT ACTTTTAATC ATCGCTGCAC TTACCACAAG CTTGCCAATT TATCAAGTAA TCATCAGTGT TTTGGAAGAA AAATTTAAAC TAGCTAAAAA TACTGCTATC AATCTAACGC TTGGAAGTAT TTTTGTCTTG GGAAATTTAC CATGCATACT TACTTATGGT CCTTTAAAAG ATATCACTAT CGTCAAAGGA AAAAATATTT TTGATAGTTT TGATTTTATT AGTGGAAATA TATTCTTTGT TTTAACCGCA TTTTTTTGTT GTATTTATGT AGGTTGGGTA CTTAAAAAAG ATGCCATTTA TGAACTTTCC AATCAAAATA CTCTAAAAGG AAGTATTTTT AAATTATGGT ATTATTATGT TAAATTTATC ATACCTTTGA TTATCTTAGT GATTTTTTAT TTTGGTATTT TTTAA
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Protein sequence | MQRQTWSNTL TYILTVAGAT IGFGATWRFP YLVGENGGGA YVLAFCIAMI FIGIPVILVE NVIGRRRMQN SVDAFGGKTS DGVKISNSWQ GVGYMGLLGS FGIMAYYMVI GGWVLAYIFK IIIGDFNLSN PINAQYTSEF YSSTIENNPL LIGIFTTIFV IINWIILKKG VIDGIEKSVK YLMPFLFICL LVVVARNLTL EGASEGVKFY LTPDLSKITP KLFIDVLGQV FFALSLGFGV MITLSSHLKK NENLIKTSVY TGILNTLIAV LAGFMIFPAL FSVGLTPDSG PSLVFKTLPV AFSHIPFGNV ICVFFFLLLI IAALTTSLPI YQVIISVLEE KFKLAKNTAI NLTLGSIFVL GNLPCILTYG PLKDITIVKG KNIFDSFDFI SGNIFFVLTA FFCCIYVGWV LKKDAIYELS NQNTLKGSIF KLWYYYVKFI IPLIILVIFY FGIF
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