Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0872 |
Symbol | |
ID | 7410452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 828146 |
End bp | 829066 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643718002 |
Product | conserved hypothetical protein, putative transcriptional regulator |
Protein accession | YP_002575449 |
Protein GI | 222823875 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.000595288 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATC TTAAAAAATA CATTGCAAAT TCTAAACTAA CACGCCTTGA AGTTTTATAT GAAAAATTAG TAAAGTCTGA AAATGGCATA ACCATAAAAG AACTAGCCCA AGAACTCAAT GTAAGCGCTA AAACCATAAA AAGAGACATG CAAGGGGTTT TTGAGCCTAT GGGACTTATT AAAAATGGAA GAAAATGGCG TATCGATACA AGCAAAGACA CTCAAGAACA AGATGATGAA AAAATAATCC TTGAAGTGCT TGATACCATG GCAAAAAGCG CTGGAAACAG TTTTTATGCT AAGGCTCACC CCCTACTTTC TAAACTTTCT CAAAATATCT CTAATCCCAT CCATACTAGC CTAGATGCAG AAAAACTAGA AGAAAAAGAT TTAAACAATT TTCAAATTCT TGAACAAGCC ATCAACACTA AAACACAAAT TGTCTTTAAA TATGAAAATA AACTTTTCCA AGCAAAACCT TTAAAACTAG CTTTTTTTAG TGGATTTTGG TATTTACTTG CTTTTGATAT GAAAAAACGA GATATTTTCA AAAAATTTTA TTTAAAAAAT ATCCAAAACA TCACCCTAAC CCAAGAACAT TTTCAAACCG ATGAAAGTTT AGAAATAAAA CTTCAAAGAG TAAATTCTAT ATGGTTTAGC CTTGATAAGC CTTTTACGGT AAGGCTTTTA GTAGAAGAAC CAATACGAAA ATACTTTGAA AGAAAGCCCT TAAATTCGCA AATCATCACT GGTAAAGACA AAGATGGCTC CATAGAAATA GAGCTTGAGA TAACTCATGA AATGGAAATT TTACCTTTGG TGTATTATTA CATACCTTAT GTAAAGGTTT TAGAGCCTGA TTTTATAGCA AATAAAGTCA AAGAAGTAGT TAAGCAATAC CTTGATCAAA TAAGCAAATG A
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Protein sequence | MKDLKKYIAN SKLTRLEVLY EKLVKSENGI TIKELAQELN VSAKTIKRDM QGVFEPMGLI KNGRKWRIDT SKDTQEQDDE KIILEVLDTM AKSAGNSFYA KAHPLLSKLS QNISNPIHTS LDAEKLEEKD LNNFQILEQA INTKTQIVFK YENKLFQAKP LKLAFFSGFW YLLAFDMKKR DIFKKFYLKN IQNITLTQEH FQTDESLEIK LQRVNSIWFS LDKPFTVRLL VEEPIRKYFE RKPLNSQIIT GKDKDGSIEI ELEITHEMEI LPLVYYYIPY VKVLEPDFIA NKVKEVVKQY LDQISK
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