| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0779 |
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| Symbol | htrA |
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| ID | 7410113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 739772 |
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| End bp | 741190 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 643717909 |
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| Product | periplasmic serine protease DO; heat shock protein HtrA |
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| Protein accession | YP_002575357 |
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| Protein GI | 222823783 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CTATAGTTCT TTCTTTAGCA TTAGCAACTA GTCTTTTCAG TGCTAGTATT
GATTTTAAAC AAGCAGATGA TAATGTAAAA AGATCTTTAC CAACTGATAA TCAAAACACT
ATACTTTCAT ATCATGATTC TATACAAAAA GTTAAAAATT CAGTTGTTAA TATCTCAACT
TCTAAAACCG TTCAAAGTAA TTCCTTTGGG ATTGATGATT TTTTCAATGA TCCTTATTTT
AAACAATTTT TTGGTTTTGA TTTTCCACAA GCTCCAAAAA GTAAAAAAAA TAAAAAAGAA
GTAGTAAGTT CACTTGGATC TGGTGTAATT ATTTCAAGTG ATGGTTATAT CATAACAAAT
AATCATGTTA TAGAAGGTGC TGAAAAAATT ACTGTAAATT TACCTGATAC AAGTACTGAA
TATAAAGCTA AATTAATCGG TGCTGATCCT AAAACAGATT TAGCAGTGAT AAAAATAGAA
GCAAAAAATT TACCTGCTGT GGTTTTTGCT GATTCGGATA AATTATTAGA AGGTGATGTA
GTGTTTGCTC TAGGTAATCC TTTTGGAGTT GGAAGTAGTG TTACAAGTGG AATTATTTCA
GCTTTAAATA AAAACAATAT CGGCTTAAAT CAATATGAAA ATTTTATACA AACTGATGCT
TCAATTAATC CAGGAAATTC AGGCGGGGCT TTAGTAGATA GCAGAGGAGC TTTAGTCGGG
ATAAACTCAG CTATACTTTC AAGAAGTGGT GGAAATAATG GAATAGGCTT TGCAATACCT
TCAAATATGG CTAAAACCAT AGCTAAAAAA CTTATTGAAA ATGGAAAAAT AGAAAGAGGA
TACTTGGGTG TGGTTATAGG AGCTTTAACT CAAGATATTA AAAAAGCTTA TACTAATCAA
GAAGGAGCTT TAATAACAGA AGTTCAAAAA GACTCAGCAG CTTATAATGC GGGTTTAAAA
AGAGGCGATT TGATCATAAA AGTGGATAAA ACATTGATCA AAAGTCCAAT GGATTTAAAA
AATTATATAG GAAGTATTGA TCCAAAACAA GCTATAGAGG TAACTTATGA AAGAGATAAT
AAAATCAAAA CAGTTAAATT TATGCTAAAA ACAGATGAAA AATCGCTACA ATATGAAAAA
GGTTATATTG ATGGTCTAAA ATTAATAGAA CTTGATTCTA AAAATAAACA ACAATACCGC
ATACCTGAAA ATATTAGTGG TATTTTAATT ACTGAAGTTA CTCCAAAATC AAAAGCAGAA
AAAATAGGCT TTGAGCAAGG TGATATCATT ATAGGTATTG ATCAATACGA AGTTTCAAAT
TTTAAAGAAT TATCTAAGGC TTTAGAATTA AATAAAGGCA AAGAATATGT TAAAATTTGG
ATTAATAGAG GCGGCATGGT TAGAGCTTTA CTTTTTTAA
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| Protein sequence | MKKTIVLSLA LATSLFSASI DFKQADDNVK RSLPTDNQNT ILSYHDSIQK VKNSVVNIST
SKTVQSNSFG IDDFFNDPYF KQFFGFDFPQ APKSKKNKKE VVSSLGSGVI ISSDGYIITN
NHVIEGAEKI TVNLPDTSTE YKAKLIGADP KTDLAVIKIE AKNLPAVVFA DSDKLLEGDV
VFALGNPFGV GSSVTSGIIS ALNKNNIGLN QYENFIQTDA SINPGNSGGA LVDSRGALVG
INSAILSRSG GNNGIGFAIP SNMAKTIAKK LIENGKIERG YLGVVIGALT QDIKKAYTNQ
EGALITEVQK DSAAYNAGLK RGDLIIKVDK TLIKSPMDLK NYIGSIDPKQ AIEVTYERDN
KIKTVKFMLK TDEKSLQYEK GYIDGLKLIE LDSKNKQQYR IPENISGILI TEVTPKSKAE
KIGFEQGDII IGIDQYEVSN FKELSKALEL NKGKEYVKIW INRGGMVRAL LF
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