Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0734 |
Symbol | |
ID | 7410068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 701930 |
End bp | 702613 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643717865 |
Product | aspartate racemase |
Protein accession | YP_002575314 |
Protein GI | 222823740 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.000319838 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAACCA TAGGTTTAAT AGGTGGAATG AGTTATGAAA GTACACTTGG TTATTATGAA ATTATCAATA AATTAACAAA TGAAAAATTA GGAAAATTAC ATAGTGCTAA GATAGTTTTA ACTAGCGTTG ATTTTGAAGA AATAGAAGAA TGCCAACGAA AGAATGATTG GCAAAAAGCA AGTGAAATTT TGACCCAACA TGCCCTACTT TTGCAAAAGT GCGGAGTTGA TTTTATATTA ATTTGTACCA ATACTATGCA TAAATGTTAT GAAAATATAC AAAAAAACAT TCAAATTCCT ATCTTACATC TAGCCAAAGC TATGCTTTTA GAACTTCAAG AGCAAAATAT CGATAAAGTA TTATTGCTAG GGACAAAATA CACTATGCAA GAAGATTTTT ATAAACAACT TTTAATTAAC TCAAAGATCG AAGTTTTTAT TCCCAAAAAT GATGATATTT TAAAGCTTAA TGATATTATT TTTAATGAGC TTTGCAAAGG TATTATAAAT GAAAAATCAA AAAGATACTT GTGTGATTTA ATTGCTCAAT TTCCACAAGT TCAAGGAGTG ATTTTGGGTT GTACTGAACT TGGTTTGATT ATAAAAGAGA GCTCCAAAAA GCTATTTGAT AGTGCATATA TTCATGCAAA AATGGCTACT TTGAAAGCTT TGGAGAATGA GTGA
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Protein sequence | MKTIGLIGGM SYESTLGYYE IINKLTNEKL GKLHSAKIVL TSVDFEEIEE CQRKNDWQKA SEILTQHALL LQKCGVDFIL ICTNTMHKCY ENIQKNIQIP ILHLAKAMLL ELQEQNIDKV LLLGTKYTMQ EDFYKQLLIN SKIEVFIPKN DDILKLNDII FNELCKGIIN EKSKRYLCDL IAQFPQVQGV ILGCTELGLI IKESSKKLFD SAYIHAKMAT LKALENE
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