| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0655 |
|---|
| Symbol | rlpA |
|---|
| ID | 7409989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 631033 |
|---|
| End bp | 631872 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643717786 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_002575235 |
|---|
| Protein GI | 222823661 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.0270867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT CAAAACTACT CAAAAATTAC CAAAAGACTC TCATACAAAA GTCGTTAGTC
GTTAGTTGTG TAGGGGTTTT ATTTAGTGCT TGTTCTATGG CACCTATAAG TGCTCCTACC
GTATATTATC CAGAGAGAGA TTTTAAAAGT GTAAAACATA ATAACACTAG TTTAAAAGGC
ACTATGAAAC CTTACACTAT TAATGGTAAA ACTTATTATC CAACTGTAGT AGAAGTAGGT
GAGACTGCTG ATGGTATAGC TAGTTGGTAT GGACCAGGTT TTCATGGTAA AAAAACCTCC
AATGGTGAAA CTTATGATCA ACACGCTTAC ACAGCGGCTC ATAAAACTTT ACCTATGAAT
ACCATAGTAA AAGTAACTAA TTTAAAAAAT CACCGTCAAA CTACGGTTAG GATTAATGAT
AGAGGGCCTT TTGTAGCAGG TAGAATTATA GATTTATCTA ATATGGCTGC AAGAGATATA
GATATGATTC AATCTGGAAC AGCTCCTGTA AGACTTGAAG TAATTGGCTT TGGAACAAGT
GCAAGTTCGG GTTCAGTTCA TACCAATTCT AATTTAGGCA GCAGTGGAGA GATTGCTGAT
AGTGGTCATA TTTTCCAAGG TGGATCTTTT ATGGTGCAAA TTGGAGCATT TAGAAATAAA
AGCGGTGCAG AGCTAATTGC AAGTAGATAT AAAAACTATA ATTCTTATAC TTCAACAATA
CAAACAAGTG CTAAAGATGG CTTACATAGA GTATTTTTAA AAGGCTTTAG AAGTGAGCAA
GAAGCAAGAG ATTTTGTTGA TAGTGGTTCC TTCCCAGGTG CGTTTATAGT AAGAGAGTAA
|
|---|
| Protein sequence | MQKSKLLKNY QKTLIQKSLV VSCVGVLFSA CSMAPISAPT VYYPERDFKS VKHNNTSLKG
TMKPYTINGK TYYPTVVEVG ETADGIASWY GPGFHGKKTS NGETYDQHAY TAAHKTLPMN
TIVKVTNLKN HRQTTVRIND RGPFVAGRII DLSNMAARDI DMIQSGTAPV RLEVIGFGTS
ASSGSVHTNS NLGSSGEIAD SGHIFQGGSF MVQIGAFRNK SGAELIASRY KNYNSYTSTI
QTSAKDGLHR VFLKGFRSEQ EARDFVDSGS FPGAFIVRE
|
|---|
| |