| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0449 |
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| Symbol | rpoB |
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| ID | 7411186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 417406 |
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| End bp | 421539 |
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| Gene Length | 4134 bp |
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| Protein Length | 1377 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643717580 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002575053 |
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| Protein GI | 222823479 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATT CACAATCAGG AAATCGTTTA AGAATAGACT TCTCGAATGT TCCACAACAA
ATAGACATTC CAAATTTATT ACAATTACAA AAGAAAAGTT TTGATTATTT TTTAAACATA
GATGCGAAAA ATTCAGAAAG TGGAATTGAA AAAGTATTTA AATCTATTTT TCCAATTCAT
GATCCGCAAA ATAGATTAAG TTTAGAATAT GTAAGTAGTG AAGTGGGCAA ACCTAAGTAC
ACTATTAGAG AGTGTATGGA AAGAGGTTTG ACTTATTCTG TAAATTTAAA AATGAAAATT
CGCCTTACTT TACATGAAAA AGATGAAAAA ACGGGTGAAA AAATTGGTAT AAAAGATATT
AAAGAACAAG AAATTTATAT TAGAGAAATT CCATTAATGA CAGATAGAAT TTCATTTATA
ATAAACGGCG TTGAAAGAGT GGTTGTTAAT CAACTTCACA GAAGCCCAGG CGTTATTTTT
AAAGAAGAAG AAAGTTCAAC TGTTGCAAAT AAATTAGTAT ATACAGCTCA AATTATACCA
GATCGTGGTT CTTGGCTTTA TTTTGAATAT GATGCTAAAG ATGTGCTTTA TGTGCGTATT
AATAAAAGAA GAAAAGTGCC TATTACAATT TTATTTAGAG CACTCGGTTA TAAAAAACAA
GACATTATAA AATTATTTTA CCCTATACAA ACTATTCATG TTAAAAAAGA TAAATTTTTA
ACAGAGTTTA ATCCAAATGA CTTTTTAGAT AGAGTCGAGT ATGACTTAAA AGATGAAAAA
GGTAATATAA TTCATCAAGC TGGTAAAAGA ATGACAAAGA AAAAGGCTGA ACAGCTTGTA
AAAGATGGGA TTAAATGGGT TGAATATCCA GTTGAAATTT TAACAAACAG ATATTTAGCT
AATCCTATTA TTAATAAAGA AACTGGTGAG GTTTTATTTG ATTCTTTAAC GCTATTAGAT
GAAAGCAAAC TAGCTAAAAT TAAAGAACAA AAAACATTTG ATATAGCAAA TGATTTGGCT
AATGGAGTAG ATGCTGCAAT TATAAATTCA TTCATTCAAG ATAATGAAAC TTTAAAATTA
TTAAAACAAA CTGAGAATAT AGATGATGAG AATGATTTAG CAGCTATTAG AATTTATAAA
GTAATGAGAC CAGGGGAACC TGTAGTGAAA GATGCGGCTA AGGCTTTTGT AAATGATTTA
TTTTTTAATC CTGAAAGATA TGATTTAACA AAAGTTGGCC GCATGAAAAT GAATCATAAA
TTAGGCTTAG ATACACCTGA ATATGTTACG GTTTTAACCA ATGAAGATAT AGTAAAAACT
GCAAAATATT TAATTAAGGT AAAAAATGGT AGAGGTCATA TTGATGATAG AGACCATTTG
GGTAATCGTC GTATTAGATC AATCGGAGAG CTTTTAGCTA ATGAATTGCA TGTTGGCTTA
GCAAAAATGC AAAAGGCTAT TAGAGATAAA TTTACGGCTT TAAATACAGA TATTGATAAA
GTAATGCCTT ATGATTTGAT TAATCCTAAG ACAATTACTG TAACAATTAT GGAATTTTTT
ACCGGCGGGC AATTATCTCA ATTTATGGAC CAAACAAACC CATTAAGTGA AGTGACTCAT
AAGCGTCGTT TATCAGCACT TGGTGAAGGT GGTTTGGTTA AGGAAAGAGC TGGGTTTGAA
GTGCGTGATG TTCATGCAAC TCATTATGGA AGAATTTGTC CTGTTGAAAC TCCAGAAGGT
CAAAACATCG GGTTAATTAA TACGCTTTCA ACTTATGCTA AAGTAAATGA TCTGGGTTTT
GTTGAAGCAC CTTATAAGAA AGTAGAAAAT GGAAAAGTAA GTAACGAAAT TGTTTACTTG
ACTGCTACTC AAGAAGAGGG TCTGGTGATT GCTGCAGCTT CAACTAAAAT CGATGAAAAA
GGTAGTATTG TTGAGGAATT TGTTGAAGCA AGACAGGATG GTGAGACTAT ACTAGCAAGA
AGAGAAGAAG TGCATTTGAT TGACCTTTGT TCGGGTATGA TTGTAGGGGT TGCAGCGTCG
TTAATCCCAT TTTTAGAACA TGATGATGCA AATAGGGCTT TAATGGGTTC AAACATGCAG
CGTCAAGCAG TGCCTTTACT AACCGCACAG GCTCCTATAG TGGGTACTGG TATGGAAAAA
ATTATCGCTC GTGATGCTTG GGAAGCTATT AAAGCTAAAA GGGCAGGGAT TGTAGAAAAA
GTTGATAATA AAAATATTTT TATTTTGGGT GAAGATGAAA ACGGACCATT TATAGATCAT
TATAAAATGG AAAAAAATCT AAGAACAAAT CAAAATACAA CTTTTACGCA GCATCCAATT
GTTAAAAAAG GAGAATTTGT TCAAGTAGGT CAAATCATTG CTGATGGTCC AAGTATGGAT
CAAGGTGAAC TTGCTATTGG CAAGAATGCC TTAATCGCAT TTATGCCATG GCATGGGTAT
AACTATGAGG ATGCGATTGT TATTAGTGAA AAAATATTGC GCGAAGATAC CTTTACTAGT
GTACATATCT ATGAAAAAGA AGTTGAAGCT AGAGAATTAA AAGATGGTGT AGAAGAAATT
ACTAAAGATA TACCAAATGT TAAAGAAGAT GACTTAGCAC ATCTTGATGA AAGTGGTATT
GCAAAAATTG GTACTCATAT TAAACCTGGT ATGATTTTAG TTGGTAAAGT TTCTCCAAAA
GGTGAAGTAA AACCAACCCC TGAAGAAAGA TTATTAAGAG CTATTTTTGG TGAAAAAGCA
GGACATGTTG TAAATAAATC TTTATATGCA ACTGCTTCTA TGGAAGGTGT TGTTGTTGAT
GTAAAAATCT TTACTAAAAA AGGCTATGAA AAAGATGCTA GAGCTATTAA AGCTTATGAT
GAGGAAAAAT TAAATTTAGA AAAAGAACAT CACGATAGAC TTTTAATGAT GGATAGAGAA
GAAACTTTAA GAGTTTGTTC ATTGCTTTCT AAATCTGCTT TAAATTCAGA TGAGGAAATA
AATGGTCAAA AATATAAAAA AGGCGCAAAA GTTGATATCA AAGAACTTGA AAAAATTAAT
CGTTTTGCGT TAAATTCTTT AGTTAAAGCG TATTCTAAAG ATGTTCAAAA AGAATATGAA
GATTTAAAAA ATCATTTCCA AAATGAGAAG AAAAAGCTCA AAAGTGAGCA TGATGAAAAA
CTTGAAATTT TAGAAAAAGA TGATATTTTA CCAAGTGGAG TAGTTAAACT TGTAAAAGTT
TATATAGCAA CCAAAAGAAA ACTCAAAGTT GGTGATAAAA TGGCTGGACG CCATGGAAAC
AAAGGTATAG TTTCAAATAT CGTTCCTGAA GTTGATATGC CATATTTACC TGATGGAAGA
CCTATTGATA TAGCTTTAAA CCCTTTAGGT GTTCCAAGTC GTATGAATAT AGGCCAAATT
CTTGAAAGTC ACTTGGGTAT AGTTGGTATG AGACTTGGTG ATCAAATTCA AGAAATTTTC
GATAAAAAAC AAAAAGATTT TATTAAGCAA TTGCGAACAA AAATTCTTGA AATTTGTAGC
GTATCAAGAC TAACTTTAGA AAAGAAATTT GTTGAAAGTT TAAACGATGA GCAGCTTATT
TCTTATGCAA GAGATTGGGC TAGAGGCGTT AAATTTGCAA CTCCTGTATT TGAAGGTGTA
ACTGTAGAAG AATTTAGCAA GCTTTTTGAG ATGGCAAAAA TAGCTATGGA TGGAAAAAGT
GAGCTTTATG ATGGAAGAAC CGGTGAGAAA ATGGCAGAAC GCGTACATGT TGGATGTATG
TATATGCTAA AACTGCATCA CTTAGTTGAT GAAAAAGTGC ATGCAAGAAG CACAGGACCT
TATAGCTTAG TAACACAACA ACCAGTTGGT GGTAAAGCAT TATTTGGTGG TCAAAGATTT
GGTGAGATGG AAGTTTGGGC TTTAGAAGCT TATGGTGCAG CGCATACTTT AAGAGAGATG
CTTACTATAA AATCTGATGA TGTTGAGGGA AGATTTAGTG CTTATAAAGC TTTAACAAAA
GGTGAGAATG TTCCAGCTAC TGGTATTCCA GAAACATTCT TTGTACTTAC AAACGAATTA
AAATCTCTTG CTTTAGATGT TGAGATTTTT GATAAGGATG AAAATAATGA GTAA
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| Protein sequence | MLNSQSGNRL RIDFSNVPQQ IDIPNLLQLQ KKSFDYFLNI DAKNSESGIE KVFKSIFPIH
DPQNRLSLEY VSSEVGKPKY TIRECMERGL TYSVNLKMKI RLTLHEKDEK TGEKIGIKDI
KEQEIYIREI PLMTDRISFI INGVERVVVN QLHRSPGVIF KEEESSTVAN KLVYTAQIIP
DRGSWLYFEY DAKDVLYVRI NKRRKVPITI LFRALGYKKQ DIIKLFYPIQ TIHVKKDKFL
TEFNPNDFLD RVEYDLKDEK GNIIHQAGKR MTKKKAEQLV KDGIKWVEYP VEILTNRYLA
NPIINKETGE VLFDSLTLLD ESKLAKIKEQ KTFDIANDLA NGVDAAIINS FIQDNETLKL
LKQTENIDDE NDLAAIRIYK VMRPGEPVVK DAAKAFVNDL FFNPERYDLT KVGRMKMNHK
LGLDTPEYVT VLTNEDIVKT AKYLIKVKNG RGHIDDRDHL GNRRIRSIGE LLANELHVGL
AKMQKAIRDK FTALNTDIDK VMPYDLINPK TITVTIMEFF TGGQLSQFMD QTNPLSEVTH
KRRLSALGEG GLVKERAGFE VRDVHATHYG RICPVETPEG QNIGLINTLS TYAKVNDLGF
VEAPYKKVEN GKVSNEIVYL TATQEEGLVI AAASTKIDEK GSIVEEFVEA RQDGETILAR
REEVHLIDLC SGMIVGVAAS LIPFLEHDDA NRALMGSNMQ RQAVPLLTAQ APIVGTGMEK
IIARDAWEAI KAKRAGIVEK VDNKNIFILG EDENGPFIDH YKMEKNLRTN QNTTFTQHPI
VKKGEFVQVG QIIADGPSMD QGELAIGKNA LIAFMPWHGY NYEDAIVISE KILREDTFTS
VHIYEKEVEA RELKDGVEEI TKDIPNVKED DLAHLDESGI AKIGTHIKPG MILVGKVSPK
GEVKPTPEER LLRAIFGEKA GHVVNKSLYA TASMEGVVVD VKIFTKKGYE KDARAIKAYD
EEKLNLEKEH HDRLLMMDRE ETLRVCSLLS KSALNSDEEI NGQKYKKGAK VDIKELEKIN
RFALNSLVKA YSKDVQKEYE DLKNHFQNEK KKLKSEHDEK LEILEKDDIL PSGVVKLVKV
YIATKRKLKV GDKMAGRHGN KGIVSNIVPE VDMPYLPDGR PIDIALNPLG VPSRMNIGQI
LESHLGIVGM RLGDQIQEIF DKKQKDFIKQ LRTKILEICS VSRLTLEKKF VESLNDEQLI
SYARDWARGV KFATPVFEGV TVEEFSKLFE MAKIAMDGKS ELYDGRTGEK MAERVHVGCM
YMLKLHHLVD EKVHARSTGP YSLVTQQPVG GKALFGGQRF GEMEVWALEA YGAAHTLREM
LTIKSDDVEG RFSAYKALTK GENVPATGIP ETFFVLTNEL KSLALDVEIF DKDENNE
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