Gene Cla_0425 details

Gene Information

• Locus tag: Cla_0425
• Symbol: glmS
• ID: 7411162
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 397759
• End bp: 399558
• Gene Length: 1800 bp
• Protein Length: 599 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643717556
• Product: glucosamine--fructose-6-phosphate aminotransferase
• Protein accession: YP_002575034
• Protein GI: 222823460
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
• TIGRFAM ID: [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing)

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGGAA TAGTAGGTTA TATAGGAACC AAAGAAAAGA AAAAAATCAT ATTAGAAGGC 
TTAAAAGAGC TTGAGTATAG AGGCTATGAT AGCGCTGGTA TAGCAGTGAT GAAAGATGGG 
GAGTTAGACT TTTTTAAAGC GGTTGGGAAA TTAGAAAATT TAGCCAATAA AACAGCACAA 
TTTCGCAGCG ATGGCTTTGG ACTTGCTATA GGTCATACGC GTTGGGCAAC TCATGGAAAA 
CCAACTGAAA TAAACGCTCA TCCGCATTTA GGCGAGTACT CTTGTGTAAT ACATAATGGA 
ATCATAGAAA ATTACCAAGA ATTAAAAACA AAACTCACAC AAGAAGGTAT TAATTTTCTA 
AGTCAAACTG ACACTGAAGT TATTGTACAT TTATTTGAGT ACTATGCAAG TAATTTCGAA 
CCATTTGAAG CTTTTAAAAA GACTATAGCT GAACTAAAAG GTGCTTTTGC AATCTTGCTT 
GTAAGTAAAA AAGATCCTAG TACTATTTAT TTTGCTAAAA ATGCTGTGCC ACTCATCATC 
GGAAAAAATG GTGATGAAAA TGAATATTAT TTTGCATCAA GTGATGCGCC TTTAGTTTCT 
TTAGTGGATA AAGTAGCTTA TCTTGAAGAT GGAGATTATG GTTATGTTAA TTTAAATGAA 
TGCAAAATTT GTCATGAGCA AGCTTGCATA CAACCTACTT TTGTGGCTTT AAGTCAAGAT 
AAAAGTTATG CTCAAAAAGA TGGTTATAGA TTTTTCATGG AAAAAGAAAT TTATGAGCAA 
AGTAGAGTTT TAGGCGAAGT TTTAATGGGA CGCTTGCAAG GTGAGCAGAT TGTTTTTGAA 
GATATAGATG AAACTCTTTT ACAAAACATA GACGAAATAA CACTTTGTGC TTGTGGCACA 
AGTTATCATG CAGCATTAAG CGGGGCTTAT TTGCTAGAAA GACTTGCTAA AGTTAAAACC 
AAAGTTGAAG TAGCAAGTGA ATTTAGATAC AGAGAGGCTA TTATAGGCAA AAATACTCTT 
TTTGTAGTGA TTTCACAAAG TGGGGAAACT GCTGATACAC TTGAAGCTTT AAAAATAGCA 
AAAGCACAAG GAGTTAAAAC TTTAGCAATA TGCAATGTGG ATAATTCTAA TATCGTGCGT 
TTGGCTGATA TATCATTACT TACTAGAGCG GGCATTGAAA AAGGTGTGGC TTCAACTAAA 
GCTTTTGCCA CTCAAGTGGC AACTTTATGG ATGCTTGCAA TCTATCTTGC ACAAAAAGCA 
AATTTAGATA TGAGCAAAGA AATCAAAGCT CTAAGAAGCT TACCAAGTAT AGTTAAAGTT 
GAGCAAAACT TGCATGAAAA AGTACACAGA ATTTCAAAAA GATACCTACA TGGCCATGGC 
TTTTTCTTTA TAGGAAGAGA TGTATTTTAT CCACTAGCAT TAGAAGGGGC TTTAAAATTA 
AAAGAAATTT CATACTTGCA TGCTGAAGGA TATCCAGCAG GTGAAATGAA ACATGGGCCT 
ATTGCTCTAG CAGATAGCGA GCTTTTTACC GTTGCACTAA TGCCACAAAA TTGCCTTTAT 
GAAAAAACCA AATCAAATGT AGAAGAATTA GCTGCAAGAG ATTCTACCTT ACTTGCTATT 
TCTCCACTTG ATTTTGACTT AAGCGATGAT TTTATAAGAA CTTCAAAACA AGAGCACTAT 
ATGTGTGAAT TTTTTGAAAT GATGGTGATC TTACAGCTTC TTGCTTTAGA AGTTTCTATA 
AGACTTGGCA ATGATGTAGA TATGCCAAGA AATTTAGCAA AAAGTGTTAC TGTAGAATAA 

 

Protein sequence

MCGIVGYIGT KEKKKIILEG LKELEYRGYD SAGIAVMKDG ELDFFKAVGK LENLANKTAQ 
FRSDGFGLAI GHTRWATHGK PTEINAHPHL GEYSCVIHNG IIENYQELKT KLTQEGINFL 
SQTDTEVIVH LFEYYASNFE PFEAFKKTIA ELKGAFAILL VSKKDPSTIY FAKNAVPLII 
GKNGDENEYY FASSDAPLVS LVDKVAYLED GDYGYVNLNE CKICHEQACI QPTFVALSQD 
KSYAQKDGYR FFMEKEIYEQ SRVLGEVLMG RLQGEQIVFE DIDETLLQNI DEITLCACGT 
SYHAALSGAY LLERLAKVKT KVEVASEFRY REAIIGKNTL FVVISQSGET ADTLEALKIA 
KAQGVKTLAI CNVDNSNIVR LADISLLTRA GIEKGVASTK AFATQVATLW MLAIYLAQKA 
NLDMSKEIKA LRSLPSIVKV EQNLHEKVHR ISKRYLHGHG FFFIGRDVFY PLALEGALKL 
KEISYLHAEG YPAGEMKHGP IALADSELFT VALMPQNCLY EKTKSNVEEL AARDSTLLAI 
SPLDFDLSDD FIRTSKQEHY MCEFFEMMVI LQLLALEVSI RLGNDVDMPR NLAKSVTVE