Gene Cla_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0414 
SymbolhydA 
ID7411151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp385975 
End bp387609 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content30% 
IMG OID643717545 
Productquinone-reactive Ni/Fe-hydrogenase, small subunit 
Protein accessionYP_002575023 
Protein GI222823449 
COG category[C] Energy production and conversion 
COG ID[COG1740] Ni,Fe-hydrogenase I small subunit 
TIGRFAM ID[TIGR00391] hydrogenase (NiFe) small subunit (hydA) 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.791101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAG GTAATGAAGA ATTAAAAAGC ATATTAGAGA AAAAAATAGC GTTATTAGAA 
AACTCACAAA AAGAAGAAAA AAATATCTCA TTAGAAGCTG TAAATTCTAT CATTAAAATT
TTAGGTTTGC CAAATGACTT TGGCCCTTTG GCGCATAGAT ATTTTCAACT TCACACTCCG
CCTAGTCTTA TATGGCTTCA TTTGAGCGAA TGTACAGGGT GTAGTGAGAG TTTGCTTAGA
ACTTCATTGC CTGATTTTTT GGATTTAATT TTTGATTTTA TTTCCTTAGA ATATCATGAA
ACCTTTATGA GTGCAAGCGG ACATCAAGCA GAATCACATT TAGAGGAAGT TTTAGAAAAA
AAAGATTTTC TTTTAGCTGT AGAAGGTGGG GTTTGTGCTA TAGATCCTTT TTATCTAACC
ATAGGAGCGC ATGGTGAAAA TGGATATGAA ATTTTACAAA AATGCGCTAA AAATGCCAAA
ACTATTTTTG CTATGGGGAC TTGCTCAAGT TTTGGAGGAA TTCAAGCTGC ACATCCAAAT
CCTACTAAAA GTATAGGAAT TTCTAAAGTC TTAGAAGAAA AAGTAATCAA TATACCAGGT
TGCCCACCAA GTGATGCAAA TATCATCGCA GCACTTTGTT TTTATATATT ATTCGAGCAA
GATATGGCTT TAGATGATCA AAATAGACCT TTAGCTCTTT ATGGAAAATG TCTTCATGAT
TTATGTGAAA GAAAGGCTAA ATTTGAGGCA GGAAATTTTG CTCAAAGCTT TGATGATGAA
AAGATAAAAG AAGGTTATTG TCTTTTTAAA GTAGGCTGCA AAGGACCTTA TGCTTATAAT
AATTGTCCTA AGGTTAAATT TAATTCTAAA ACTTCTTGGC CAGTAGCTGC AGGACATGGA
TGCATTGCTT GTAGTGAAGA GAATTTTTGG GATGATTTTG GTTTTTATGA AAAACCTATG
AGTAATGAAT TTGCTTATAA TGATTTTTCT ATTATATTAG ATGATAAAAT AGTCTATAAT
AGCTCTATCA ATGAGCTTAA TTCAAATAAT ATTTTACTAG ATTTAGAAAG TGATACTAGT
GGGATTTTTT ATCAAAATGA TACAAAGGTT AATTTTTTAG ACTTTAGTTT TGAAGCTAAT
CCTAAAGTTT TCTTAAATAA TTTTGCAAAA ACCAAAATGG CTATGACTTT AGTACAAAAC
TATCAAGAGC AATTTAAAAC ATATTATGAT TTTATACAAG AAAATTACGA TGATGAAAGC
AAAACTAGCA ACAATATCTT AGATTTATTT TATTTTATAT ATCCATTTAT TAGTGGAAAA
AAATTAAACC ATTTAGATGA GTTTTTAGAT CTTGCTCTAG CTTATAAGTT TAAACATCCT
AGCAAATTTG ATTTTAAAAT CACAATTAAT GAGCAAGCAA AATTTGATGT TTCTAAATCA
ATGCGTATGC CTTTAATTTA TATTCTAGGC GGTTTAGATA AAGAAGGCAT TGCTTTTGGC
TTGATTTTTT CTTTAAAAGA GCATTTAAAA CAAGCTCTAA AGGCATGCAA AAAGACACAT
AGCAAAGAGC AAATTTTAGT ATGTGCAAAA AACGAAAAAT TATTAAAATT ATTTTGGGAT
TTAACGAGCA TTTAA
 
Protein sequence
MSLGNEELKS ILEKKIALLE NSQKEEKNIS LEAVNSIIKI LGLPNDFGPL AHRYFQLHTP 
PSLIWLHLSE CTGCSESLLR TSLPDFLDLI FDFISLEYHE TFMSASGHQA ESHLEEVLEK
KDFLLAVEGG VCAIDPFYLT IGAHGENGYE ILQKCAKNAK TIFAMGTCSS FGGIQAAHPN
PTKSIGISKV LEEKVINIPG CPPSDANIIA ALCFYILFEQ DMALDDQNRP LALYGKCLHD
LCERKAKFEA GNFAQSFDDE KIKEGYCLFK VGCKGPYAYN NCPKVKFNSK TSWPVAAGHG
CIACSEENFW DDFGFYEKPM SNEFAYNDFS IILDDKIVYN SSINELNSNN ILLDLESDTS
GIFYQNDTKV NFLDFSFEAN PKVFLNNFAK TKMAMTLVQN YQEQFKTYYD FIQENYDDES
KTSNNILDLF YFIYPFISGK KLNHLDEFLD LALAYKFKHP SKFDFKITIN EQAKFDVSKS
MRMPLIYILG GLDKEGIAFG LIFSLKEHLK QALKACKKTH SKEQILVCAK NEKLLKLFWD
LTSI