Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0414 |
Symbol | hydA |
ID | 7411151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 385975 |
End bp | 387609 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643717545 |
Product | quinone-reactive Ni/Fe-hydrogenase, small subunit |
Protein accession | YP_002575023 |
Protein GI | 222823449 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.791101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTAG GTAATGAAGA ATTAAAAAGC ATATTAGAGA AAAAAATAGC GTTATTAGAA AACTCACAAA AAGAAGAAAA AAATATCTCA TTAGAAGCTG TAAATTCTAT CATTAAAATT TTAGGTTTGC CAAATGACTT TGGCCCTTTG GCGCATAGAT ATTTTCAACT TCACACTCCG CCTAGTCTTA TATGGCTTCA TTTGAGCGAA TGTACAGGGT GTAGTGAGAG TTTGCTTAGA ACTTCATTGC CTGATTTTTT GGATTTAATT TTTGATTTTA TTTCCTTAGA ATATCATGAA ACCTTTATGA GTGCAAGCGG ACATCAAGCA GAATCACATT TAGAGGAAGT TTTAGAAAAA AAAGATTTTC TTTTAGCTGT AGAAGGTGGG GTTTGTGCTA TAGATCCTTT TTATCTAACC ATAGGAGCGC ATGGTGAAAA TGGATATGAA ATTTTACAAA AATGCGCTAA AAATGCCAAA ACTATTTTTG CTATGGGGAC TTGCTCAAGT TTTGGAGGAA TTCAAGCTGC ACATCCAAAT CCTACTAAAA GTATAGGAAT TTCTAAAGTC TTAGAAGAAA AAGTAATCAA TATACCAGGT TGCCCACCAA GTGATGCAAA TATCATCGCA GCACTTTGTT TTTATATATT ATTCGAGCAA GATATGGCTT TAGATGATCA AAATAGACCT TTAGCTCTTT ATGGAAAATG TCTTCATGAT TTATGTGAAA GAAAGGCTAA ATTTGAGGCA GGAAATTTTG CTCAAAGCTT TGATGATGAA AAGATAAAAG AAGGTTATTG TCTTTTTAAA GTAGGCTGCA AAGGACCTTA TGCTTATAAT AATTGTCCTA AGGTTAAATT TAATTCTAAA ACTTCTTGGC CAGTAGCTGC AGGACATGGA TGCATTGCTT GTAGTGAAGA GAATTTTTGG GATGATTTTG GTTTTTATGA AAAACCTATG AGTAATGAAT TTGCTTATAA TGATTTTTCT ATTATATTAG ATGATAAAAT AGTCTATAAT AGCTCTATCA ATGAGCTTAA TTCAAATAAT ATTTTACTAG ATTTAGAAAG TGATACTAGT GGGATTTTTT ATCAAAATGA TACAAAGGTT AATTTTTTAG ACTTTAGTTT TGAAGCTAAT CCTAAAGTTT TCTTAAATAA TTTTGCAAAA ACCAAAATGG CTATGACTTT AGTACAAAAC TATCAAGAGC AATTTAAAAC ATATTATGAT TTTATACAAG AAAATTACGA TGATGAAAGC AAAACTAGCA ACAATATCTT AGATTTATTT TATTTTATAT ATCCATTTAT TAGTGGAAAA AAATTAAACC ATTTAGATGA GTTTTTAGAT CTTGCTCTAG CTTATAAGTT TAAACATCCT AGCAAATTTG ATTTTAAAAT CACAATTAAT GAGCAAGCAA AATTTGATGT TTCTAAATCA ATGCGTATGC CTTTAATTTA TATTCTAGGC GGTTTAGATA AAGAAGGCAT TGCTTTTGGC TTGATTTTTT CTTTAAAAGA GCATTTAAAA CAAGCTCTAA AGGCATGCAA AAAGACACAT AGCAAAGAGC AAATTTTAGT ATGTGCAAAA AACGAAAAAT TATTAAAATT ATTTTGGGAT TTAACGAGCA TTTAA
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Protein sequence | MSLGNEELKS ILEKKIALLE NSQKEEKNIS LEAVNSIIKI LGLPNDFGPL AHRYFQLHTP PSLIWLHLSE CTGCSESLLR TSLPDFLDLI FDFISLEYHE TFMSASGHQA ESHLEEVLEK KDFLLAVEGG VCAIDPFYLT IGAHGENGYE ILQKCAKNAK TIFAMGTCSS FGGIQAAHPN PTKSIGISKV LEEKVINIPG CPPSDANIIA ALCFYILFEQ DMALDDQNRP LALYGKCLHD LCERKAKFEA GNFAQSFDDE KIKEGYCLFK VGCKGPYAYN NCPKVKFNSK TSWPVAAGHG CIACSEENFW DDFGFYEKPM SNEFAYNDFS IILDDKIVYN SSINELNSNN ILLDLESDTS GIFYQNDTKV NFLDFSFEAN PKVFLNNFAK TKMAMTLVQN YQEQFKTYYD FIQENYDDES KTSNNILDLF YFIYPFISGK KLNHLDEFLD LALAYKFKHP SKFDFKITIN EQAKFDVSKS MRMPLIYILG GLDKEGIAFG LIFSLKEHLK QALKACKKTH SKEQILVCAK NEKLLKLFWD LTSI
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