Gene Cla_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0348 
SymbolmloC 
ID7410256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp321450 
End bp322478 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content28% 
IMG OID643717480 
Producthypothetical protein 
Protein accessionYP_002574959 
Protein GI222823385 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000520981 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA ATATAAAACG AAATCTTGCT ATGGATTTTT TAAGTTTTAG CTTGGAAAAT 
CAGGAAGATT TTTTAGAAGT GATTTATAAA GATGATGATA TATGGCTTAG CGTGGCTTTA
ATGGCTAAGT TATTTGAGTG CTCTAGTGAT AATATTTATT TACATCTTAA TAATATTTAT
AAAGAAAATG AGCTTGATAA AAATTTAACT TCCGAGGAAA TCTCGGTAGT TCAAAAAGAG
GGCAAAAGAG AAGTTAAAAG AAAGATTGCA TTTTATAATC TTGATGCTAT TATAAGTGTA
GGATATAGAA TAAATTCTTA TAAAGCTACA AAATTTAGAC AATGGGCTAC GACAATTTTA
AAACAATTTA GCATTAAAGG GTATGTGCTA GATAAAGAGC GTTTGAAAAA TGGTAGTGCG
ATAAATAAAA ACTATTTTGA TGAGCTTTTA GAAGAAATTA GAGAAATAAG AGCTAGCGAG
AGATTGTTTT ATCAAAAAAT AACAGATATT TACACAACGG CGATTGATTA TGATAAAAAT
GATGAATTAA CTAAAGAATT TTTTGCTAGT GTGCAAAATA AACTTCATTT TGCTACACAT
GGACACACTG CAGCAGAGCT CATAAAGCAA AGAGCAAATC ATAAAAAAGA AAATATGGGA
CTTTATACAT GGAAAAATGC CCCTGAGGGA AAAATTTTAC AAAGTGATGT GGTGATTGCC
AAAAATTATC TTAGTCAAGA TGAACTTTTA GAATTAAATC GTATAGTTGG TATGTATCTT
GATTATGCTG AAGATAGAGC AAAGAAAAAT ATAGCTATGA GTATGCAAGA TTGGAAAGAT
AGATTAGATA TTTTTTTAGA ATTTAATGAA AGAGAAATTT TAAAAGATAA TGGCAAAATA
AGTAAGAAAC TAGCAGATGA TTTTGCTAAA GAAGAATTTT ATAAATTTAG AATTATTCAA
GATAAAAACT ACAAGTCTGA TTTTGACAAG GCTATTTTAA AAGCTTTAAA GGATAAAAAT
GCAAAATAA
 
Protein sequence
MQKNIKRNLA MDFLSFSLEN QEDFLEVIYK DDDIWLSVAL MAKLFECSSD NIYLHLNNIY 
KENELDKNLT SEEISVVQKE GKREVKRKIA FYNLDAIISV GYRINSYKAT KFRQWATTIL
KQFSIKGYVL DKERLKNGSA INKNYFDELL EEIREIRASE RLFYQKITDI YTTAIDYDKN
DELTKEFFAS VQNKLHFATH GHTAAELIKQ RANHKKENMG LYTWKNAPEG KILQSDVVIA
KNYLSQDELL ELNRIVGMYL DYAEDRAKKN IAMSMQDWKD RLDIFLEFNE REILKDNGKI
SKKLADDFAK EEFYKFRIIQ DKNYKSDFDK AILKALKDKN AK