Gene Cla_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0229 
Symbol 
ID7410952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp203010 
End bp204233 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content28% 
IMG OID643717364 
Productchlorohydrolase 
Protein accessionYP_002574843 
Protein GI222823270 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATAA TAGCACCTAA AATCATCTTA ACTTGCGATG ATGATTTTAA TATTTTAGAA 
AACAAAGCAG TTCTTTTTGA TGATAATATT TTAGAAATTA ATAGCTTAGA AATTTTACAA
AAATCCTACC CACAAGCTAA ACTTATACAA ATTCCAAAAG ATAGTTTGCT TTTACCTGCT
TTTATCAACC CTCACACGCA TTTAGAATTC AGTGCAAATA ATGGAAATTT AGTATTTGGA
GACTTTTTAA AATGGCTTGA TAGCGTTTTT AATAACCGCG AGCAATTAAG CCAAAAAGCA
AAAGAAAAAT TAATCTTGCA AAATATCCAT AAAATGCTAA AAAGTGGTAC TGCAACCATA
GGTGAAATTT CAAGTTTTGG GAGTGATTTA AACCCTTGTG TCAATTCACA AGCTAGAGTG
ATTTATTTTA ATGAAATTTT AGGCTCAAAT GAGGCTTTTT TACAAGAAAA ACAAAATGAA
TTTTTAAAAA GATATGAAAC TAGTTTGAAA TTTAAAAACT CTAAATTTAT CCCTGCTATT
TCAGTGCATG CACCCTATTC AACCCACCCA GAACTTGCCA AATTTGCTAT AAAACTTGCT
AGAGAAAATG ATCATTTGTT AAGCACGCAT TTTCTTGAGA GTAACCATGA AAATAATTGG
TTAAGATTTA AAAAGGGTGG ATTTAAAAAA AGTTTAGCTA AATTTAGCAA AAATCCCACA
CCATTTTACA CCCCACAAAG TTTTTTAGAG CTTTTTAAAG ATCAAAGGAC TTTATTTACT
CATTGTGTGT ATTTTAAAGA ATGGGATTTA TTAGATAAAA ATTTACACTC TATTACTCAT
TGTGCATTTT CAAACAAACT TTTGAGTAAA TCTACTTTGA AATTAAAACA AGCGTTAAAA
AATGGAGTAA ATATCCACTT AGGAAGTGAT GGTTTAAGCT CAAATGTATC ATTAAGTATG
CTAGATGAAA TGCGAACAAA TTTATTAATC CATAATGATT TTGAGTTAGA AAATTTTGCT
AAAATACTAC TTTTAATGGC AACAAACAAA ACTGCTAAAG CCTTAAATTT AAACTTAGGC
GAAATTAAAA AAGGTAAAAT CGCTGATTTT AGCGTATTTA AACTACCAAA TAGCACAAGT
TTAAAACAGC TTCCATTGCA GTTTATTTTA CAATGCAAAG AAGTTTCAAA ATTATTTATC
GAAGGAAAAG AATGCAACTT ATAA
 
Protein sequence
MFIIAPKIIL TCDDDFNILE NKAVLFDDNI LEINSLEILQ KSYPQAKLIQ IPKDSLLLPA 
FINPHTHLEF SANNGNLVFG DFLKWLDSVF NNREQLSQKA KEKLILQNIH KMLKSGTATI
GEISSFGSDL NPCVNSQARV IYFNEILGSN EAFLQEKQNE FLKRYETSLK FKNSKFIPAI
SVHAPYSTHP ELAKFAIKLA RENDHLLSTH FLESNHENNW LRFKKGGFKK SLAKFSKNPT
PFYTPQSFLE LFKDQRTLFT HCVYFKEWDL LDKNLHSITH CAFSNKLLSK STLKLKQALK
NGVNIHLGSD GLSSNVSLSM LDEMRTNLLI HNDFELENFA KILLLMATNK TAKALNLNLG
EIKKGKIADF SVFKLPNSTS LKQLPLQFIL QCKEVSKLFI EGKECNL