| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0228 |
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| Symbol | pspA |
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| ID | 7410951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 202129 |
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| End bp | 203022 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643717363 |
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| Product | protease IV |
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| Protein accession | YP_002574842 |
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| Protein GI | 222823269 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTA TAAAATCATT TTTTAAAGGC ATAGGCAAAA TAATCTCTTT TATAAACACT
TATTTTAAAA CCTTTGTGTT TTTATTTATA GTTTTTTTAA TCCTTTCTCC AAGCAAAGAT
AATACAAAAC TTTCCAATGC AAACTTAGCA CAAATCAACC TAAAGGGTGA AATTAACGAT
GCAAGCACTC TTTTAGAACA AATTTATAAA CTCAAAGATG ATAATGCTAT AAAAGGGGTT
TTATTTTATA TAGATAGCCC TGGTGGAGCT TTTGCACCAA GCATGGAGAT AGCTTTAGCC
ATACAAGATC TAAAAGCTAA AAAACCTGTA GTAGCATATG CTGGTGGGAC TATAGCAAGT
GGGAGTTATT TAAGTGCGGT GGGAGCTAAT ATGATCATCG CTAATCCTGC TAGTTTTGTA
GGATCAATTG GCGTAATTAT GCAAGGTTTT AATGCAAGTG AATTAGCGCA AAAAATAGGC
ATAAGTGATC AAACCATAAA AGCTGGAACT TATAAAGAAG CAGGGACTTT CATGCGTAAA
TGGAGCAAAG AAGAAAAAGA ATTTTTACAA AATTTAGCCA ATCAAAGCTA TATTCTTTTT
ACAAATTTTG TAGCTAAAAA TCGTAATTTA GATTTAAATC AAACAAAATC ATGGGCTGAT
GCGAAAGTGT TTTTGGCAAA TGAGGCTTTA AAATTAAAAT TAATTGATAA AGTAGGAAAT
TACGAGCTTG CTAAAAAAGA AGTGGAAAAA CTAGCCAAGG TCAAAAACCC TATCTGGCAA
AAAGAAGATG CTATAGATAA ATTTTTAAAA CGATTAGAAG AGCAAAGCGC TAGCTTTTTT
GCTAACACTT TAGCGCAATT TTTCACACAA GTAAGCTCAC AAAAAATCTA CTAA
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| Protein sequence | MQLIKSFFKG IGKIISFINT YFKTFVFLFI VFLILSPSKD NTKLSNANLA QINLKGEIND
ASTLLEQIYK LKDDNAIKGV LFYIDSPGGA FAPSMEIALA IQDLKAKKPV VAYAGGTIAS
GSYLSAVGAN MIIANPASFV GSIGVIMQGF NASELAQKIG ISDQTIKAGT YKEAGTFMRK
WSKEEKEFLQ NLANQSYILF TNFVAKNRNL DLNQTKSWAD AKVFLANEAL KLKLIDKVGN
YELAKKEVEK LAKVKNPIWQ KEDAIDKFLK RLEEQSASFF ANTLAQFFTQ VSSQKIY
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