| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0198 |
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| Symbol | exbD1 |
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| ID | 7410921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 177241 |
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| End bp | 177627 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643717333 |
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| Product | TonB system transport protein ExbD |
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| Protein accession | YP_002574812 |
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| Protein GI | 222823239 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.00125254 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTAG AAGAAAAACC TGAACTCAAT ATTACACCCT TAGTAGATAT TATGCTTGTG
TTGCTTGCTA TTTTAATGGT AACAGCACCA AGTATCACAT ATGAAGAAAA GGTTCAACTT
CCTCAAGGTT CGCAAAAAAC TTCAAGTGCG CCAAACATTA AAAGTTTGAT TATAACAATT
AATGCAAAAA AAGAAATTTT TATAGGAAAA GATAAATTTG ATTTTATAAG TTTTGCAGAT
AATATGAATG CTTTAAAAGT TCAGTATAAT ACTCAAGAGA CAGTTTTTAT AAGAGCAGAT
AAGAATTTAA AATATGATGA TGTAATGAGT GTTTTAAGAA CAATGAAACA TTTAGGTTTC
CAAAAAGTTG CCTTGCAAAC TGAGTAA
|
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| Protein sequence | MFLEEKPELN ITPLVDIMLV LLAILMVTAP SITYEEKVQL PQGSQKTSSA PNIKSLIITI
NAKKEIFIGK DKFDFISFAD NMNALKVQYN TQETVFIRAD KNLKYDDVMS VLRTMKHLGF
QKVALQTE
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