| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0195 |
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| Symbol | atpD |
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| ID | 7410918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 174827 |
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| End bp | 176281 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643717330 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_002574809 |
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| Protein GI | 222823236 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0011768 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGGTT TTATTTCTCA AGTTTTAGGA CCAGTGGTTG ATGTTGAATT TAAAGACTAC
CTTCCACAAA TTAATGAAGC TATTGTTGTT AATTATGAAT TAGAAGGAAA AGAATGCAAG
CTAGTTCTTG AAGTAGCTGC ACATTTAGGT GATAATAAAG TAAGAACCAT CGCTATGGAT
ATGACAGATG GTCTTGTTAG AGGTTTAACA GCCGTCGCAA CTGGAAATCC AATTAGTGTT
CCAGTAGGCG AAAAAGTTCT TGGAAGAATT TTTAATGTAA CGGGTGATTT GATTGATGAG
GGCGAAGAAA TCAATTTTGA TAAGCACTGG TCAATTCATA GAGATCCACC TCCATTTGAA
GAACAAAGTA CAAAAAGCGA AATCTTTGAA ACAGGTATAA AGGTTGTTGA TTTGCTAGCT
CCTTATGCTA AAGGTGGAAA AGTTGGTCTT TTTGGTGGTG CAGGTGTTGG TAAAACCGTT
ATTATTATGG AATTAATTCA CAATGTTGCA TTTAAACATA GCGGATATTC TGTTTTTGCA
GGTGTTGGCG AAAGAACTCG TGAGGGTAAT GACCTTTACA ATGAAATGAA AGAAAGTAAT
GTATTAGATA AAGTTGCATT GTGTTATGGT CAAATGAATG AACCGCCAGG GGCAAGAAAT
CGTATAGCTT TAACAGGTCT TACTATGGCT GAGTATTTTA GAGATGAAAT GGGACTTGAT
GTTTTAATGT TTATTGATAA TATTTTCAGA TTTTCTCAAT CAGGTTCAGA AATGTCAGCA
CTTTTAGGAA GAATTCCTTC AGCTGTTGGT TATCAACCAA CCTTAGCTAG CGAAATGGGT
AAGTTCCAAG AAAGAATTAC TTCAACCAAG AAAGGATCTA TTACTTCAGT TCAAGCAGTT
TATGTGCCAG CAGATGACTT AACAGACCCT GCACCAGCAA CAGTTTTTGC GCACTTAGAT
GCAACAACGG TTTTAAATAG ATCAATCGCT GAAAAAGGTA TTTATCCTGC TGTTGATCCA
CTTGATTCTA CTTCAAGAAT GTTAGATCCT CAAATCATAG GAGAAGAACA CTATAAAGTG
GCTCGTGGAG TTCAGTCAGT GCTTCAAAAA TATAAAGATT TGCAAGATAT TATTGCTATT
TTAGGTATGG ATGAATTAAG CGAAGAAGAT AAATTGATTG TTGAAAGAGC AAGAAAAATT
GAAAAATTCC TATCTCAACC ATTCTTCGTC GCTGAAGTTT TCACAGGTAG CCCTGGAAAA
TATATTAGCT TAGAAGATAC AATTGCAGGA TTTAAAGGTA TTTTAGAAGG TAAATATGAT
GATTTACCAG AAAATGCTTT CTACATGGTT GGTAATATAG ATGAAGCTAT AGCAAAAGCT
GAAACACTTA AAGAAGTTAG CAGAAAAGAT GTTTGTTTAG ATAATTGTAA AGTGGATAAG
GCTAAAAAAG GTTAA
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| Protein sequence | MQGFISQVLG PVVDVEFKDY LPQINEAIVV NYELEGKECK LVLEVAAHLG DNKVRTIAMD
MTDGLVRGLT AVATGNPISV PVGEKVLGRI FNVTGDLIDE GEEINFDKHW SIHRDPPPFE
EQSTKSEIFE TGIKVVDLLA PYAKGGKVGL FGGAGVGKTV IIMELIHNVA FKHSGYSVFA
GVGERTREGN DLYNEMKESN VLDKVALCYG QMNEPPGARN RIALTGLTMA EYFRDEMGLD
VLMFIDNIFR FSQSGSEMSA LLGRIPSAVG YQPTLASEMG KFQERITSTK KGSITSVQAV
YVPADDLTDP APATVFAHLD ATTVLNRSIA EKGIYPAVDP LDSTSRMLDP QIIGEEHYKV
ARGVQSVLQK YKDLQDIIAI LGMDELSEED KLIVERARKI EKFLSQPFFV AEVFTGSPGK
YISLEDTIAG FKGILEGKYD DLPENAFYMV GNIDEAIAKA ETLKEVSRKD VCLDNCKVDK
AKKG
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