Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0161 |
Symbol | topA |
ID | 7410884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 138777 |
End bp | 140864 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643717296 |
Product | DNA topoisomerase I |
Protein accession | YP_002574775 |
Protein GI | 222823202 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT TAATAATAGT AGAATCACCC GCTAAGGCAA AAACTATAGG AAATTTTTTA GGAAAAGATT ATGAAGTAAT AGCTTCTAAA GGTCATATTA GAGATTTGCC AAAAAGTAGT TTTGGTATAA AAATAGAAGA TGAAAATTTC AAACCAGAAT ATAGAATTTC AAGCGATCAT TCTACTTTAG TAAAAGAATT AAAAGAAAAA GCAAAAAATG CAAAACAAAT CTATCTTGCA ACCGATGAGG ATCGCGAAGG AGAAGCTATA GCTTATCACA TAGCAAAAGC TATAAATAAA GATGAAAATT CATTACCTAG GATAGTTTTT CATGAAATTA CAAAATCAGC TATAGAAAAT GCACTAAATA ATCCAAGACA TCTTGATATA AATAGCGTTA ATGCCCAACA AGCTAGACGC TTGCTTGATC GCATTGTAGG ATATAAATTA AGCCCTTTGT TAAATCAAAA AATTCAAAAA GGTCTTAGTG CAGGCCGTGT TCAAAGTGCG GCATTAAAAA TCATAGTAGA TAGAGAAAGA GAAATTAAAG CTTTTACTCC TTTAAAGTAT TTTAGTATCG ATGTAATTTT TAAAAAAGAT TTAGAAGCTG AATTGGTAGA ATTTCAAGGC CAAAAAATAG AAAAATTTAC CATAACTAAC GAAGATAGAG CAAAATTAAT CTTTGAAAAT TGCAAAAATG CTAAATTTAA AATAAATAAT ATAGAAAGCA AAGATAGAAA AATAACCCCA CCACCACCTT TTATGACTTC TACTTTGCAA CAAAGCGCTA GCAATCGCTT AGGGTTTAAC CCTAAAAAAA CTATGATGAT AGCTCAAAAG CTTTATGAGG GCGTAAAAAC TCATCAAGGC ATTATGGGCG TGATCACTTA TATGAGAACT GATAGTTTAA ATATAGCTAA AGAAGCATTA GAGCAAGTAA GAAAACTTAT AAAAGATGAA TTTGGAAAAG AATATTTACC AGCTAAAGCA AACATTTATA CTACAAAAGC CAAAGGCGCT CAAGAAGCAC ATGAGGCTAT AAGACCTACG AATTTAAGCT TTACTCCAAA ACTTGCAAGT GAGTTTTTAG AAAAAGATGA AGCAAGATTA TATACTTTAA TATACAATCG CTTCTTAGCT TCACAAATGA ACCCTGCTAT CTCTCAAACT CAAAATGTCT ATGCAAAATC AAATGAAGCA AGTTTTAAAA TAAGTGGTAG AAAAATTTTA TTTGATGGAC ATTATAAAGT ATATGGAGAT ATGGATAAAG ATAAAATTTT ACCTAATTTA AAGCTAGAAG ATACATTAAA TATCCAAAAT ATAGAATTCA ACTCACATTT TACCGAGCCA CCTTCTAGAT ATTCTGAAGC TGGACTTGTA AAAAAACTTG AAAATTTAGG CATAGGACGC CCTTCTACTT ATGCTCCAAC TATTTCTTTA CTTAGCGCAA GAGATTATGT GCGTATAGAT AAAAAACAAC TTATCCCAAA TGAAATAGCA TTTAATGTAA TAGAAGTTTT AGAACAAAAT TTTAGCGATA TAGTAGATAG TGATTTTACT TTTAAAATGG AAGAATCTTT AGATGAGATA GCAGAAGGAA AACTTGATTG GCAAGAGCTT TTAAGAGAAT TTTACTTTCC TTTTATGAGA AAAATTGATG AGGGTAAAAA AAATATAAAA AGCCAAAAAA CTATTACAAA AATAGATGAA ACTTGCCCTG ATTGTGGTGG CGAGCTTGCT ATAAGAAAAG GAAGATATGG AGAATTTATA GCATGTTTAA ATTTTCCAAA ATGTAAATAT TCAAGAAATT TAAAACAAGA AAACAAAAAT GAAGAAAAAA CTCAAATCAA ACAAGTAAAT TCAATAGGAT TAACTTGTCC AGAGTGTAAA AAAGGTGAGA TAGTAGAGCG TTTTTCTAAG CGTGGTAAAT TTTATGGATG TAGTGCTTAT CCAAAATGTA ATTTTATAAG CAAATACAAG CCGAGTGAAG AAAAATGCGA AGAATGTGGT GAAAATTTAA TAATTAAAGA ATTAAAAAAA GGCACATTTT TAGAATGCTT AAAATGTAAA ATCAAAAAGG AAATCTAA
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Protein sequence | MKNLIIVESP AKAKTIGNFL GKDYEVIASK GHIRDLPKSS FGIKIEDENF KPEYRISSDH STLVKELKEK AKNAKQIYLA TDEDREGEAI AYHIAKAINK DENSLPRIVF HEITKSAIEN ALNNPRHLDI NSVNAQQARR LLDRIVGYKL SPLLNQKIQK GLSAGRVQSA ALKIIVDRER EIKAFTPLKY FSIDVIFKKD LEAELVEFQG QKIEKFTITN EDRAKLIFEN CKNAKFKINN IESKDRKITP PPPFMTSTLQ QSASNRLGFN PKKTMMIAQK LYEGVKTHQG IMGVITYMRT DSLNIAKEAL EQVRKLIKDE FGKEYLPAKA NIYTTKAKGA QEAHEAIRPT NLSFTPKLAS EFLEKDEARL YTLIYNRFLA SQMNPAISQT QNVYAKSNEA SFKISGRKIL FDGHYKVYGD MDKDKILPNL KLEDTLNIQN IEFNSHFTEP PSRYSEAGLV KKLENLGIGR PSTYAPTISL LSARDYVRID KKQLIPNEIA FNVIEVLEQN FSDIVDSDFT FKMEESLDEI AEGKLDWQEL LREFYFPFMR KIDEGKKNIK SQKTITKIDE TCPDCGGELA IRKGRYGEFI ACLNFPKCKY SRNLKQENKN EEKTQIKQVN SIGLTCPECK KGEIVERFSK RGKFYGCSAY PKCNFISKYK PSEEKCEECG ENLIIKELKK GTFLECLKCK IKKEI
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