| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0138 |
|---|
| Symbol | ktrB |
|---|
| ID | 7411370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 116934 |
|---|
| End bp | 118277 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643717274 |
|---|
| Product | TRK system potassium uptake protein TrkB, putative |
|---|
| Protein accession | YP_002574753 |
|---|
| Protein GI | 222823180 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAT TATCCTTAGA TAGAAAAAAT ATAAGAATTT TATTCATAGG CTACATTCTA
GTTGCACTTT TTGGCACCTT TATTTTAATG CTTCCTATTA TGCATACCAA GCCTATATCT
TTTTTAGATG CATTTTTTAC TAGCGCCTCA GCTGTAAGCA TGACAGGGCT TATTGTGTTA
AATACCTCGC TAGATTTTAG CTTTTATGGT CAACTTGTTA TTTTATTGCT TATTCAAATA
GGTGGCTTGG GATACATGAG CATAGCTATG GCTTTATATA TTTTAGTGCG TAAAAAAATG
AGCTTTGGAG AAAAAAATCT TTTAAGAGAA TCTTTAATTT ATCCTGAATC TGATGGCCTT
GTAGGATTTT TAAAAAAGGT TTTATTTTTT GTATTTGCCA TTGAATTTAC AGGAGCTATT
TTATTATTTT TAAGATTTAA ACTAGACATG AATTTAACTG AAGCTCTATG GGCTAGTGTT
TTTCACTCTA TTTCTGCTTT TAATAATGCA GGATTTAGTA TATTTGAAAG CGGAATGATG
CCCTATAGAG ATGATTTTTG GATTAACTTT ATCATCACCT CTTTGATTAT CGTTGGAGGT
TTGGGATATT TTGTATTGTT AGAATTATAT TTTTTTTCCA AAAAGCGCTT TGCTAGTTTG
AGTCTGCACA CAAAGCTTGT TTTAATTTCT ACTATTATAC TAATCATTTT TGCGAGTTTG
ATTGTGTTTT TATTTGAATA TCATAACCCA AAAAGCATAG GAGAATTTTC TCTCTTTGAT
AAAATTATGA GTGCATATTT TACAGCAGTA AATTATCGAA CAGCAGGGTT TAACACTCTT
GATCTTAGCA CTTTTAAAGA TGCAAGCTTA TTTTTTGGAT CTTTGTTTAT GATTGTAGGT
GGTGCACCTG GTGGAACTGC GGGAGGTATT AAAGTCACTA CGGTTGCTGT ATTATTAATC
TATGCTTATT GGAGTATCAA AGATAGCAAT GCAAGAATTT TCAACTTTGA AATTCCTACA
GAAACTATCA ACAAAGCTTT CATTATAGCA GTAAGTTCTA TTGTGTATAT CATTACTTGT
GTATTAATTT TATCCTTAAT CGAAGATGAT AAAAGTTTTT TACCCTTGCT TTTTGAAACA
AGTTCAGCAT TTGCTACAGT AGGGGTTTCA GTAGGAGATG GTGGGACTTT ATCGTTTAGC
GCACTTTTTA ATTCCGAAAG CAAATTACTT ATTATATTGT TAATGCTTAG TGGTAGAGTG
GGAGTGCTTG CATTTTTATT TAGTATATTT TTTAAAGAAA AAGAAAAATA TTTAAATTAT
CCAAAAGGAA AGATAATATT ATGA
|
|---|
| Protein sequence | MAKLSLDRKN IRILFIGYIL VALFGTFILM LPIMHTKPIS FLDAFFTSAS AVSMTGLIVL
NTSLDFSFYG QLVILLLIQI GGLGYMSIAM ALYILVRKKM SFGEKNLLRE SLIYPESDGL
VGFLKKVLFF VFAIEFTGAI LLFLRFKLDM NLTEALWASV FHSISAFNNA GFSIFESGMM
PYRDDFWINF IITSLIIVGG LGYFVLLELY FFSKKRFASL SLHTKLVLIS TIILIIFASL
IVFLFEYHNP KSIGEFSLFD KIMSAYFTAV NYRTAGFNTL DLSTFKDASL FFGSLFMIVG
GAPGGTAGGI KVTTVAVLLI YAYWSIKDSN ARIFNFEIPT ETINKAFIIA VSSIVYIITC
VLILSLIEDD KSFLPLLFET SSAFATVGVS VGDGGTLSFS ALFNSESKLL IILLMLSGRV
GVLAFLFSIF FKEKEKYLNY PKGKIIL
|
|---|
| |