Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0107 |
Symbol | flgE |
ID | 7411339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 90993 |
End bp | 93437 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643717243 |
Product | flagellar hook protein FlgE |
Protein accession | YP_002574724 |
Protein GI | 222823151 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR02489] flagellar hook protein FlgE, epsilon proteobacterial [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000370744 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGAT CTCTTTGGGC TGGAGTTTCA GGACTTCAAG CACACCAATA CGCAATGGAT GTAGAAGGTA ACAACATAGC CAATGTTAAT ACATTTGGTT TTAAATATTC TCGTGCAGAT TTCTCAACGC TTATGAGTCA AACTTCTAAG ATAGCTACAG CTCCAGATGG CAATCTAGGT GGTAAAAATC CTATGCAAGT TGGACTTGGT GCAGGTGTGA ATTCTACTAC TAGAATTCAC TCTCAAGGTA ATATCCAAAC TACAGATAAA AACACCGATA TGGCGATCAA TGGTGATGGA TTTTTCATCG TTTCAAATGA TGGTGGTACC ACTCAGTTTT TCACCCGTGC AGGGGACTTT AAAACAGACG CAGTAGGAAA TTTCGTAGAT AATAACGGTT ACACCGTTCA AGGCTGGAAT TATAATCAAG AAACAGGGCA AATCGACTCT TCTAAATCAG TAACAGATAT AGTCATCCCA CCTGGTATGA GTATGCCTGC TAGACCAAGT TCTTCAGTAA GTCTTACAGC AAATTTAGAT AGTGGTAATA CTCTAGGCAC AAATGCTTCT GCTAAAAGAC CTATCTATGC ACTTGATTCT TTACATGGTG GTAGAAAAGA TACAGGAACA ACCATAGATG AGAATGATAC TGGCCATACA GAGTTTTATA CTACTTCTAA AAGTGGAGCC CAAGTAACCG AAAAAGGTGT AGACATGGGT GTGGTGTTTA ACGCTCAAGG TGAGGGTTTA AACCTACGCG ATGGACAAGG TATTTGGGTG AGTTATGCTG ATGCTAAGCA TACATCAAAT GCAACAATGG CAACAGATTT ACCAACAGAT CCAGCTCAGT GGACAAATGG TAATCATACT TTTTGGGGTT ATAAAGACGG TGGGGATGCT GTTTTAGACA TAACTATCAA TGGGGTTCAT ATTAGAGCAG AAGGTGTGGG TAAAGATACT TTTTTAAATG CGATTAATGC CAAAACATCT GAAACCGGGG TAGTGGCTTC TATAGTGAAT AATCAATTTG TATTTACTAA TGATAATAGC ACAGGAACCA CAGCAAAATC TAAAAATTTA AATATTGTAG TAAATCAAGG TAATACTGTT GGGGCTCAAG TTACTGTTGG AAAAGGAGAC ACACCTGGTG CTAGACTTTC TTTAAATAGA ACAGCTTTTA ACAACAATCC TATGGCTGCT ATTTTAGGAA CAAATGCCAA TAATATTATG AAAAACAATG TCCAAGTAGT AACTGCTCAT GAGTATATTT ATAGTAAAAA TGGAGTAGAC ATAGGGCCAA ATCCAAATCC GAATGCAAAT CCACCTGAAA ATGCAAATAT GCCAACTGCA AATGGTCAAA GAAGATTTCA TACTACAGAA GATTTAAGAG AGCTTTTGCA AAGAGATGCT AGATGGGGTG TGGATTATGA TGGTGATGGA TCATTGGAGA ATGTTAATAA TCCTGCAGGT GGAAATAATA TTGGTGAAGA TGCAAACCCT CTAGTAGAGG TAGTGGTGGA AAGTGATGGT AGATTTAAAA TAACCAATCC TACAGGCGGG AAAGATATGA CTTTTAAAGT GACAGGTTTT TCAGATGAGG TCAATAAAAT CGCTACAAAC GATAAATTCA CAGCGATGTT TAGCGCTCTA GATGGAAATT TCAACGCAGG TAATAATGAA AAATACTCTC AAGATATGTA TCTTTCGGCT CATACTGCTA GTATAGAAAT CTTTGACTCA TTAGGAACTA GACATGAACT AACTGTGCAA TTTACTAAGC AAAGTAAAAC AGCAGATGGT GGGGCTGAAT GGTCTATCAT CATCTCAGTG CCTGAACCTG CAGAGATTAA TTTCAGTGGC GATGGAGCTC CGGGAAATAT AGTAGTAGGA AATTTAAGAT TTGGCAATGA TGGCTCGCTT CAAAGCTATA CACCAAATGT ATTAAATTTT ACCGGAAATA ACGGCTCAAA ACCTGACCAA GTAATCAAAC TTGACTTTGG AACAACAGGT GGTTTTGATG GTTTAACAAG CTATGATAAA GACTCAGCTA CCACTAAACA AGAAACCGAT GGTTACACAG GGGGTAACTT AAAACCAGAT GCATTAAGAA CTGATGAGAA TGGTTATATC TATGGAGAAT TTACAAATGG TAAAACTCTA GCTTTAGCTA AAGTAGCTCT AGCGACCTTC CCAAATAATA TGGGTCTTGA AGAAATGGGT AATAACCTTT ATAAAGCGAC AGCAAACTCA GGAACAGCTA CCATAGGTCA TGCTGGTGAA GGTGGTAGAG GGGGCTTAAA AGGCTCAGCT ATAGAAATGT CGAATGTGGA TTTAAGTCGT GCATTAACAG AGCTTATCGT AATCCAAAGG GGTTATCAAG CAAACTCAAA AACGATTACC ACAAGCGATC AGCTTTTAAA TACTTTGCTT CAATTAAAAC AATAA
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Protein sequence | MMRSLWAGVS GLQAHQYAMD VEGNNIANVN TFGFKYSRAD FSTLMSQTSK IATAPDGNLG GKNPMQVGLG AGVNSTTRIH SQGNIQTTDK NTDMAINGDG FFIVSNDGGT TQFFTRAGDF KTDAVGNFVD NNGYTVQGWN YNQETGQIDS SKSVTDIVIP PGMSMPARPS SSVSLTANLD SGNTLGTNAS AKRPIYALDS LHGGRKDTGT TIDENDTGHT EFYTTSKSGA QVTEKGVDMG VVFNAQGEGL NLRDGQGIWV SYADAKHTSN ATMATDLPTD PAQWTNGNHT FWGYKDGGDA VLDITINGVH IRAEGVGKDT FLNAINAKTS ETGVVASIVN NQFVFTNDNS TGTTAKSKNL NIVVNQGNTV GAQVTVGKGD TPGARLSLNR TAFNNNPMAA ILGTNANNIM KNNVQVVTAH EYIYSKNGVD IGPNPNPNAN PPENANMPTA NGQRRFHTTE DLRELLQRDA RWGVDYDGDG SLENVNNPAG GNNIGEDANP LVEVVVESDG RFKITNPTGG KDMTFKVTGF SDEVNKIATN DKFTAMFSAL DGNFNAGNNE KYSQDMYLSA HTASIEIFDS LGTRHELTVQ FTKQSKTADG GAEWSIIISV PEPAEINFSG DGAPGNIVVG NLRFGNDGSL QSYTPNVLNF TGNNGSKPDQ VIKLDFGTTG GFDGLTSYDK DSATTKQETD GYTGGNLKPD ALRTDENGYI YGEFTNGKTL ALAKVALATF PNNMGLEEMG NNLYKATANS GTATIGHAGE GGRGGLKGSA IEMSNVDLSR ALTELIVIQR GYQANSKTIT TSDQLLNTLL QLKQ
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