| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0095 |
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| Symbol | rpoA |
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| ID | 7411327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 80407 |
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| End bp | 81420 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643717231 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_002574712 |
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| Protein GI | 222823139 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0151927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACATA TTACAACTTC TGCTTATACA CCAACAGAGT TTAGTATTGA AAATATCAGT
GATACAGTAG CAAAAGTAAG CGCATGGCCT TTTGAAATCG GCTATGCTAT TACTTTGGCG
CATCCTTTGC GTCGTTTGCT TTATTCAAGT ACAGTAGGTT TTGCTCCAAC AGGAGTTAAA
ATCAAAGGCG TAGCACATGA ATTTGATAGT ATGCGTGGTA TGCTTGAAGA TGTAGCATTG
TTTATTATCA ATCTAAAAAA ATTAAGATTT AAACTAAAAA CAGATTCTGA AAAAGAAATC
GTAACTTTTA GTTTTAAAGG ACCAAAAGAA ATTTGCGGAA AAGACTTAGA TAACGATGTT
GTTGAGGTTG TGAACGCAGA TAGCTATCTT GCAACGATTA ATGAAGATGC GGATTTAGAA
TTTACCTTAA TCATTGAAAA AGGTATAGGT TATGTGCCTT CTGAAGAAGT ACAAAATTTC
TTAGATCCTG AATTTATAGC ACTTGATGCA TTCTTTACCC CGGTAAAACA TGCGGTTTAT
GATATAGAAA AAGTGCTTTT TGAAGACAAT CCAGACTATG AAAAAGTAGT TTTCACTATA
ACAACTGATG GCCAAATTTC ACCAAGTGAT GCTTTTAAAA ATGCTTTAGA AGCAATGTAT
AAACAATTAT CAGTGTTTGA TAAAATCACT AATGCTCAAA GCGTTGTAAG AAGCCAAACA
CAAAATAATG AAGTAGAACA TGTAAAATTA CTTCAAAATA TAACTGAGTT AAATTTAGGT
GCAAGAAGTT TTAACTGTTT AGAAAAAGCA AATGTAGTTT ATATAGGCGA ACTTGCTTTA
ATGAACGCAA GTGAACTTGC AGATTTAAAA AATCTAGGTA AAAAATCTTT AGATGAGATT
AAAAGTGTAA TGGAGTCTAT AGGTTTTCCT ATAGGAAATT CAAAACTCAG TGATAGTGCA
AAAGAAACGC TAAAGAAAAA AATTACAGAA TTAAAAGCAC AAAATGAAGG ATAA
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| Protein sequence | MRHITTSAYT PTEFSIENIS DTVAKVSAWP FEIGYAITLA HPLRRLLYSS TVGFAPTGVK
IKGVAHEFDS MRGMLEDVAL FIINLKKLRF KLKTDSEKEI VTFSFKGPKE ICGKDLDNDV
VEVVNADSYL ATINEDADLE FTLIIEKGIG YVPSEEVQNF LDPEFIALDA FFTPVKHAVY
DIEKVLFEDN PDYEKVVFTI TTDGQISPSD AFKNALEAMY KQLSVFDKIT NAQSVVRSQT
QNNEVEHVKL LQNITELNLG ARSFNCLEKA NVVYIGELAL MNASELADLK NLGKKSLDEI
KSVMESIGFP IGNSKLSDSA KETLKKKITE LKAQNEG
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