Gene Cla_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0087 
Symbol 
ID7411319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp74271 
End bp76073 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content29% 
IMG OID643717223 
ProductMCP-domain signal transduction protein 
Protein accessionYP_002574704 
Protein GI222823131 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACT CAAATAAAAA ATCTTTTTCT TTTTTAAAGC AATTTATTAC TTTGTCAGCT 
GTAGTTTTAG TACTACTTTT AACTTTAACT TTATTTATTT TTAACACTTA TAGCACTACT
AAAAAAAATT CACTCATCAT GGGTTCTTTT CAAAAATTAG AAATTCTAGA TACTAAAATA
GATGAGATTT TTAAAAACAA ACTCAATTTG CAAAATTATG ACACTAGCGT TGCTTTAATA
CAAGATTTTG AAAATACTTT AGCAATTTTA AAAGCCAATA AAATTGACAT CAAAAAAATA
CAAACGATTT TTGAGAAAAA AAATACTCAA TTACAGCATT TTAAATCGGC TAATTCTATC
GCTATAAATT CAAAACTTTA TCTTTATGAA ATTCAACAAG AAATCATCAA AGCAACTAAC
AAAATAGCAC TTAGCGCACA AGAAGCAAAA CAAATTAATA CGATGGGAAA TATTTTGAGT
ATCATAGGTA CTATGGATAT TTTAGAACCA TTGGCTCAAA ATAGATTGCA AGGTTTAATA
TCGAGCTTAA ACATAGAAAA TTCTCAACTT CCACGAGAAT TATTTGAACT TTTTAGCACA
CACTGCAAAA TGATATTAAA CCAAATTAAA ATTTTAAAAG ATAATTCTCA AAGTTATCTT
GATCAAGAAT TACAAAAAGA AATCATATCC CACAAAAGTT TCATTACGCA AGAAATCAAT
CTTAATAATA AATACAATCT TTATACCGCT ATAGGAATTT TCTTATTTAC TTTAATTGTA
TTGGTATTTT TTATATTACT AACATTAAAA AAAGTAATCA TACCTATATC TTTGCTTGAA
AAACTAAGTG CAAATCTAGC AGGAGAACAT GCAAACTTAA GCGCAAGATT AAATATTGAT
AAAAAAAGTG AATTAGCTAC AAGTGCTGGC TATATAAACT CTTTTATACA AATAGTACAA
AATTCAATTT TAGAAGCTAT ACAAACTGCA AATTCAAGCC ACAAAAGCTC ACAAAAACTG
TCTCAAAATG CTGAAGTTTT ACAGCAAAGC TCACTTTTAC AACATGAACA AATTTCTAAT
GTCCATGAAA TAAGTTCTAT CTTGGAAAGT CATATAGATT TAACACAAAA TTTAGCTAAA
AATACTATAA ATGATATGCA TGATATGCAA GAGGTAATGG CTAAAGTCGA ACTTACGCTT
AAAGAATTAG TAGAGCTTAT ATTGTTAAGT GGCGAAAAAG AACAAAGTGT TTTAAGTGCT
ATGGACATGT TAGTACAAAG TGCTGATAGT ATAGTAGAAG TTACCACAAC CATAAAAGAT
ATAGCCGATC AAACCAACCT ACTTGCGCTA AATGCAGCTA TTGAAGCAGC GCGCGCAGGT
GAACACGGAC GCGGCTTTGC TGTGGTTGCA GATGAAGTTA GAAATCTAGC CGATAAAACC
ACAAAATCTT TGGTTGCTAT AGAAACTACC GTAAGAACCA TAGTGCAACA AATCAATGAT
AATAAAAGTT TGATGGATGG AATTCATCAA TCCATGAATG ATACTTCCAA TAAAGCCAAC
ATCTTACAAG GTGAAGTTGG AACTTCTATA GAAAAATTAA AAACAAGTAT TCATTCTACA
CAAATCATGG AAGAAAAAAG TGATGAATCA AAAGCTAAAA TGAGTGAGTT AGAACAAAAT
ATAGAAAAAG TAACCGAGCT TGCAAATTGT GTTAAAAATT ACTCCCTTGA TTTAACACAA
ATTTCACAAG ATGTTTTAGA AAATGCTTCT AAACTTTCAG AAAAACTAAA AACATTTGAG
TAA
 
Protein sequence
MTHSNKKSFS FLKQFITLSA VVLVLLLTLT LFIFNTYSTT KKNSLIMGSF QKLEILDTKI 
DEIFKNKLNL QNYDTSVALI QDFENTLAIL KANKIDIKKI QTIFEKKNTQ LQHFKSANSI
AINSKLYLYE IQQEIIKATN KIALSAQEAK QINTMGNILS IIGTMDILEP LAQNRLQGLI
SSLNIENSQL PRELFELFST HCKMILNQIK ILKDNSQSYL DQELQKEIIS HKSFITQEIN
LNNKYNLYTA IGIFLFTLIV LVFFILLTLK KVIIPISLLE KLSANLAGEH ANLSARLNID
KKSELATSAG YINSFIQIVQ NSILEAIQTA NSSHKSSQKL SQNAEVLQQS SLLQHEQISN
VHEISSILES HIDLTQNLAK NTINDMHDMQ EVMAKVELTL KELVELILLS GEKEQSVLSA
MDMLVQSADS IVEVTTTIKD IADQTNLLAL NAAIEAARAG EHGRGFAVVA DEVRNLADKT
TKSLVAIETT VRTIVQQIND NKSLMDGIHQ SMNDTSNKAN ILQGEVGTSI EKLKTSIHST
QIMEEKSDES KAKMSELEQN IEKVTELANC VKNYSLDLTQ ISQDVLENAS KLSEKLKTFE