Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0078 |
Symbol | secY |
ID | 7411310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 65328 |
End bp | 66590 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643717214 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_002574695 |
Protein GI | 222823122 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG CATTGACAAA TAAAATTCTC ATTACATTAG CTTTTTTATT TGCTTATAGA ATATTAGCTT ATGTTCCAGT TCCGGGGGTT AATGTCAGTG TTATCAAGGA ATTTTTTGAT TCTAATGCTT CTAATGCATT AGGCTTGTTT AATATGTTTA GTGGAGGTGC TGCTGAAAGA CTTAGTATCA TCTCTCTAGG CATTATGCCT TATATTACTG CTTCTATTAT TATGGAGCTT TTAGCTGCAA CTTTTCCTAA CATAGGAAAG ATGAAAAAAG AACGCGATGG TATGCAAAAA TATATGCAAA TTATCCGTTA TGCTACTATA GCTATCACTT TAATCCAAAG TATAGGTGTT TCTATAGGCT TGCAAAGCTT ACATGGAAAA GCTGGGCAAT CAGCTATTAT GATAGATATG AATACTTTTA TAGCACTATC AGCTGTTTCA ATGCTAGCAG GAACTATGCT TTTGATGTGG ATAGGTGAGC AAATCACCCA ACGCGGTATA GGAAATGGTA TTTCATTAAT TATCTTTGGT GGTATTGTTT CTACTATCCC AAGTGCAATT AGTGGAACGG TAAATTTGGT AAACACAGGC GAGATGAATT TCTTGACTAT CATTGCTATT TTAGTTGTAA TTTTACTTAC TATTTGGGCT ATTATAGTAG TAGAACTTGG AGAGAGAAGA ATTCCTATTT CTTACTCAAG AAAAGTAATC ATGCAAAATC AAAACAAACG CATTATGAAT TATATTCCTA TCAAGATAAA TTTAAGCGGG GTAATTCCTC CTATTTTTGC AAGTGCGATT TTGATGTTTC CAAGTACTAT TTTACAAACG AGTACAAATG AATATGTGTT AAAAATTTAT GATTTTTTAA ATCCAAATGG ATTTTTCTTT CATATTTTAA CATTCTTACT TGTAATCTTC TTTGCGTATT TTTATGCTTC AATTGTCTTT AATGCAAAAG ATATAGCAGA AAATCTTAAA AGACAGGGTG GATTTATACC AGGAATTAGA CCAGGGGAAG GAACTGCAAA TTATTTAAAT GAAGTTGCTT CAAGATTAAC GCTTTCGGGT TCTATTTATT TAGGATTAGT ATCTACTTTA CCTTGGTTGA TAGTTAAATT CTTTGGTGTG CCATTTTATT TTGGTGGAAC TTCTGTATTG ATCGTTGTTC AAGTTGCTCT TGATACGATG AGAAAGATTG AAGCTCAAAT TTATATGAAT AAATACCAAA CTTTAAGCGC AGTAGGTTTA TAA
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Protein sequence | MNKALTNKIL ITLAFLFAYR ILAYVPVPGV NVSVIKEFFD SNASNALGLF NMFSGGAAER LSIISLGIMP YITASIIMEL LAATFPNIGK MKKERDGMQK YMQIIRYATI AITLIQSIGV SIGLQSLHGK AGQSAIMIDM NTFIALSAVS MLAGTMLLMW IGEQITQRGI GNGISLIIFG GIVSTIPSAI SGTVNLVNTG EMNFLTIIAI LVVILLTIWA IIVVELGERR IPISYSRKVI MQNQNKRIMN YIPIKINLSG VIPPIFASAI LMFPSTILQT STNEYVLKIY DFLNPNGFFF HILTFLLVIF FAYFYASIVF NAKDIAENLK RQGGFIPGIR PGEGTANYLN EVASRLTLSG SIYLGLVSTL PWLIVKFFGV PFYFGGTSVL IVVQVALDTM RKIEAQIYMN KYQTLSAVGL
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