Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0071 |
Symbol | rplE |
ID | 7410632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 62352 |
End bp | 62897 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643717207 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_002574688 |
Protein GI | 222823115 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.0205797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAGAC TAAAAGAAAA ATACACTCAA AATATCAAAC CTGCTTTGGT AAAAGAATTT GATATTAAAA ATCCTATGCT TATACCTTTT ATAGAAAAAG TTGTTATAAG TGTTGGTGCT GGAGAATTAG CTAAAGATCA AAAAGTATTG CAAAATGTTG CTGATACTAT TTCTTTAATA GCTGGACAAA AAGCAGTTAT TACAAAAGCT AAAAAATCAG TTGCTGGTTT TAAAGTAAGA GAAGGTTTTC CAGTTGGTGT TATGGTAACT TTAAGAAAAG ATAATATGTA TGCTTTTTTA GATAAATTAA TTACCATTGC ACTTCCTCGT GTGAAAGACT TTAGAGGTCT TCCAAGAGAT GGTTTTGATG GAAGAGGAAA TTACAACTTT GGTTTAGACG AGCAGTTAAT GTTCCCAGAA GTTGAATATG ATAAAATTTT AAGAACTCAT GGTATGAATA TTTCTATCGT TACAACAGCA AAATCAGATA AAGAGGCACA AAAATTATTA GAATTATTTG GCGTGCCATT TGCAAAAGGA AAGTAA
|
Protein sequence | MMRLKEKYTQ NIKPALVKEF DIKNPMLIPF IEKVVISVGA GELAKDQKVL QNVADTISLI AGQKAVITKA KKSVAGFKVR EGFPVGVMVT LRKDNMYAFL DKLITIALPR VKDFRGLPRD GFDGRGNYNF GLDEQLMFPE VEYDKILRTH GMNISIVTTA KSDKEAQKLL ELFGVPFAKG K
|
| |