Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0050 |
Symbol | sodB |
ID | 7410611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 50340 |
End bp | 50993 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643717186 |
Product | superoxide dismutase (Fe) |
Protein accession | YP_002574668 |
Protein GI | 222823095 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.408378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAT TAAGAAAACT ACCTTATGAA GCAGATGCTT TTGGAGACTT TTTAAGTGCA GAAACTTTTG CGTTTCATCA TGGCAAACAC CACCAAACTT ATGTAAATAA CCTAAACAAT CTTATCAAAG ATACTGAATT TGTAGGAAAA GATTTAGTTT ATATTATTCA AAACTCAAAT GGTGGAGTTT TTAACAACGC TGCTCAAGTT TATAATCATG ACTTTTATTT TGATTGCATT AAACCAAAAA CATGCTGTGG CTGTGGCTGT TCTTTAAGTG ATGAGTTTAA AGCAGCAGTG GAAAAAGACT TTGGTTCTAT GGAGAATTTA AAAGAAGAAT TTATTAAAGG TGCTACAGGA GTATTTGGTT CTGGTTGGTT TTGGCTAGTT TATAATACTC AAAATCAAAA ATTAGAACTA GTAGCTACAA GTAATGCTGC TACACCTATT ACTGAAGGTA AGGTTCCGCT TTTAGTAGTT GATGTATGGG AGCATGCTTA CTATGTAGAT CACCGTAATG CGCGCCCTGC GTATTTAGAC AAATTCTACG CGCACATTAA CTGGGAATTC GTAGCAAAAG CTTATGAATG GGCTATCAAA GAAGGTATGA ACTCAGTAAG TTTTTATGCA AACGAATTGC ACCCTGTAAA ATAA
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Protein sequence | MFELRKLPYE ADAFGDFLSA ETFAFHHGKH HQTYVNNLNN LIKDTEFVGK DLVYIIQNSN GGVFNNAAQV YNHDFYFDCI KPKTCCGCGC SLSDEFKAAV EKDFGSMENL KEEFIKGATG VFGSGWFWLV YNTQNQKLEL VATSNAATPI TEGKVPLLVV DVWEHAYYVD HRNARPAYLD KFYAHINWEF VAKAYEWAIK EGMNSVSFYA NELHPVK
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