| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0048 |
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| Symbol | nrdD |
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| ID | 7410609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 47512 |
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| End bp | 49791 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643717184 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_002574666 |
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| Protein GI | 222823093 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA AATTTATTAT AAAAAGAGAT AAAAGCCAAG TTGCATTTGA TATTTTCAAA
ATTAAAAATG CCATTTTTAA AGCTAATATA AACTCCATAG ATGAAAAATT AAATAATGAT
TTTTTAGATA AGCTTTGCGA TGAGGTTGTA GCTTTACTGG ATGAAAAACA CATACAAGTA
GAACAAATTC AAGATAAAGT TGAAGAAGTT TTAATCAAAA ACGCCTTAGT CAATACTGCA
AAATCTTATA TTTTATACCG TCAAAAAAGA ACACAAATTC GCAACGGTAG CTACGATTTG
CTAAGTTTAT ATGATGATTT AACTTTTAAA GATTCTAAAG AAGCTGATTT AAAAAGAGAA
AATGCAAATA TTAATTCAGA TAGCGCTATG GGTATGATGT TAAAATATGG TTCAGAAGGA
GCAAAATACT ATGTAGATGA GTGTATTTTG CCAAAACATA TCGCAAATGC ACATAAAAAC
GGCGATATAC ACATACACGA TAAAGATTTT TATATGCTAA CACAAACTTG CTGTCAAATA
GACTTATTAA AGCTTTTTGA AAATGGTTTT AGCACAGGAC ATGGAAGCTT GCGTGAGCCA
AACGATATTA GATCTTATGC TTCTTTAGCT TGTATTGCCT TGCAGGCTAA TCAAAATGAG
ATGCATGGGG GTCAATCTAT ACCCAATTTT GATTTTGCTA TGGCAAAAGG CGTGGCAAAG
ACTTTTCAAA AAGAGTATAA AAAGGCTATA AATGCTTTTT TTGAAATAAA ATTAGAGCAA
AGTTTGGATG AGCAATGCTT TAAAAATGCT AATTTTCAAG TTTCAAGCGA AAAAGAATGC
TTCAAAGAGC TTTTAAAGCT TGAATTAAAT AGCGATGAGA ATTTTTTAAA ACAAGCAAAT
GCTTATGCTT ATAAAAGAGC ATTAAAACAA ACTCAAGATG CGACTTTTCA AGCTATGGAA
GCTTTAATAC ATAATCTTAA TACTATGAAC TCAAGAGCAG GAGCCCAAGT GCCTTTTAGT
ACGCTAAATT ATGGTACCGA TACTTCTTTT GAAGGGCAAA TGGTAATAGA AAATTTACTC
AAAGCTACGA TGAGAGGCTT AGGAAATGGC GAAACGCCAA TTTTCCCTGT GCAAATTTTT
AAAGTAAAAG AGGGTGTTAA TTATAATGAA ACAGATCCAA ACTATAAGCT TTTTAAGCTT
GCCATAGAAT GCGCTTCTAA AAGACTTTTT CCAAATTTTA GCTTTTTAGA TGCAAGTTTT
AATGCAAAAT ACTATAAAAA GGGCGATTAT AATAGCGAAG TAGCTTATAT GGGTTGTAGA
ACTAGGGTTA TGGCAAATGT TTATGATGAG AGCAAAGAAA TCACAAGTGG CAGGGGAAAT
TTAAGCTTTA CAAGTATAAA TCTTGTGCGT TTAGCTATAG AAGCTAAAGG AAATTTAGAG
CTTTTTTACT CACTTTTAAA AGAAAAATTA GAGCTTGTGT ATGAGCAATT ACTTCATAGA
TACAAAATTC AAAGTCTAAA AAAGGTTAAA AATTTCCCAT TTTTAATGGG CGAGGGAGTT
TGGATAGATT CAGATACTTT AAAAGAAAAT GATAGCGTAG AAAAAGTTAT TGCACACGGG
ACTTTGGCTA TAGGTTATAT AGGACTTTGT GAGAGTTTAA TAGCTTTGAT AGGTTCTCAT
CATGGACAAA GTCAAGAAGC AAGGGAGCTT GGCTTGCAAA TCGTGCGTTT TATGCGTGAA
TTTATCGATG AAAAAGCGCG TAAAGATAAA CTGAATTTTT CACTCATAGC TACCCCAGCT
GAAGGTTTAA GTGGGAGATT TTTAAAGCTA GATCAAAAAA AATACGGCAT TTTAAAAGGC
ATAACTGATA AAGAATTTTA TACTAATTCC TTTCATATTC CTGTAGATTT TCCTATCAAT
ATCTATGAAA AAATTCAAAT AGAAGCCCCA TATCATGAGT TAAATAATGG TGGGCATATT
ACTTATGTAG AATTAAATGG CGATGTAAGT AAGAATTTAG AAAGTTTTGA ACGCATTATA
AAATGCATGA AAGAAAGCAA TATAGGCTAT GGCTCGATTA ATTTCCCTCT AGATAGAGAT
CCAGTATGTG GCTATAGTGG CGTGATAGAT GAGTTTTGTC CAAAGTGTCA TAGAAAAGAA
GATGATATTA AATTTGAACG CATCAGAAGA ATCACGGGTT ATTTAGTAGG AACGCTTGAT
CGTTTTAATG ATGCTAAAAA AGCTGAAGTT CATGCAAGAA TTAAGCACGA TTTTTCTTAG
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| Protein sequence | MKIKFIIKRD KSQVAFDIFK IKNAIFKANI NSIDEKLNND FLDKLCDEVV ALLDEKHIQV
EQIQDKVEEV LIKNALVNTA KSYILYRQKR TQIRNGSYDL LSLYDDLTFK DSKEADLKRE
NANINSDSAM GMMLKYGSEG AKYYVDECIL PKHIANAHKN GDIHIHDKDF YMLTQTCCQI
DLLKLFENGF STGHGSLREP NDIRSYASLA CIALQANQNE MHGGQSIPNF DFAMAKGVAK
TFQKEYKKAI NAFFEIKLEQ SLDEQCFKNA NFQVSSEKEC FKELLKLELN SDENFLKQAN
AYAYKRALKQ TQDATFQAME ALIHNLNTMN SRAGAQVPFS TLNYGTDTSF EGQMVIENLL
KATMRGLGNG ETPIFPVQIF KVKEGVNYNE TDPNYKLFKL AIECASKRLF PNFSFLDASF
NAKYYKKGDY NSEVAYMGCR TRVMANVYDE SKEITSGRGN LSFTSINLVR LAIEAKGNLE
LFYSLLKEKL ELVYEQLLHR YKIQSLKKVK NFPFLMGEGV WIDSDTLKEN DSVEKVIAHG
TLAIGYIGLC ESLIALIGSH HGQSQEAREL GLQIVRFMRE FIDEKARKDK LNFSLIATPA
EGLSGRFLKL DQKKYGILKG ITDKEFYTNS FHIPVDFPIN IYEKIQIEAP YHELNNGGHI
TYVELNGDVS KNLESFERII KCMKESNIGY GSINFPLDRD PVCGYSGVID EFCPKCHRKE
DDIKFERIRR ITGYLVGTLD RFNDAKKAEV HARIKHDFS
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